Pre_GI Gene

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Host: NC_015259 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015259:485015 Polymorphum gilvum SL003B-26A1 chromosome, complete genome

Host Lineage: Polymorphum gilvum; Polymorphum; ; ; Proteobacteria; Bacteria

General Information: Polymorphum gilvum SL003B-26A1 is a type strain of a newly published novel species in the novel genus Polymorphum. It was isolated from a crude oil-polluted saline soil in Shengli Oilfield, China and could use the crude oil as the sole carbon source. Oil pollution has become a global issue because of its severe ecological impact and destruction. Bioremediation is proved to be an effective process to restore the oil polluted environments. The complete genome sequence of Polymorphum gilvum SL003B-26A1 provides new strategies for bioremediation of oil contaminated environment.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
485015485755741Retinitis pigmentosa 1-like 1 proteinQuickGO ontologyBLASTP
485927486214288hypothetical protein
4862484888452598ATPase AAA familyQuickGO ontologyBLASTP
4891374910951959Peptidase M23M37 family proteinQuickGO ontologyBLASTP
491075491341267hypothetical protein
491871493346147616S ribosomal RNAQuickGO ontologyBLASTP
49357349364977tRNA-IleQuickGO ontology
49375449382976tRNA-AlaQuickGO ontologyBLASTP
494187496851266523S ribosomal RNAQuickGO ontologyBLASTP
497219497297795S ribosomal RNAQuickGO ontologyBLASTP
49740249747877tRNA-MetQuickGO ontology
498151498381231hypothetical protein
499364500089726Replication initiator and transcription repressor proteinQuickGO ontologyBLASTP
500375500545171Probable insertion sequence transposase proteinQuickGO ontologyBLASTP
500683501105423Transposase and inactivated derivatives-like proteinQuickGO ontologyBLASTP
502090502311222hypothetical proteinBLASTP
5024025044262025Plasmid transfer factor traGQuickGO ontologyBLASTP
504960505904945Peptidase M neutral zinc metallopeptidase zinc-binding siteQuickGO ontologyBLASTP
5061845078211638Flagellar hook-basal body proteinQuickGO ontologyBLASTP
5100455111601116Flagellin-like proteinQuickGO ontologyBLASTP
511583511882300hypothetical protein
5125615139131353Putative transposase proteinQuickGO ontologyBLASTP
514692514994303hypothetical protein
516218517012795Isrso1-transposase proteinQuickGO ontologyBLASTP
517135517458324BLASTP
519669519974306hypothetical protein
519978520208231hypothetical proteinBLASTP
520205520567363Putative transposon proteinQuickGO ontologyBLASTP
5206245224651842Helix-turn-helix Fis-typeQuickGO ontologyBLASTP
522490522729240hypothetical protein
523201523494294hypothetical proteinBLASTP
523563524069507hypothetical protein
524106524663558Predicted transcriptional regulatorQuickGO ontologyBLASTP
524903525268366Phosphoglycerate kinaseQuickGO ontologyBLASTP
526098526310213hypothetical protein
526893527372480hypothetical proteinBLASTP
5274555290591605Relaxasemobilization nuclease family proteinQuickGO ontologyBLASTP
529142529756615Plasmid pRiA4b ORF-3 family proteinQuickGO ontologyBLASTP
529808530140333PEMK-like proteinQuickGO ontologyBLASTP
530134530385252Transcriptional regulatorantitoxin MazEQuickGO ontologyBLASTP
530435530824390hypothetical proteinBLASTP
5308405323061467Plasmid transfer factor traGQuickGO ontologyBLASTP
532878533531654LuxR family transcriptional regulatorQuickGO ontologyBLASTP
534242534460219hypothetical protein
5350705378382769Prophage LambdaMc01 helicase SNF2 familyQuickGO ontologyBLASTP
5383445415413198hypothetical proteinBLASTP
541555542544990hypothetical proteinBLASTP
5425445448442301hypothetical proteinBLASTP
545307546179873Predicted transcriptional regulatorQuickGO ontologyBLASTP
547070547291222hypothetical proteinBLASTP
5473145485251212Integrase family proteinQuickGO ontologyBLASTP
5491645502431080Transcriptional regulator AraC familyQuickGO ontologyBLASTP
5507325522041473Serine protease subtilase familyQuickGO ontologyBLASTP
552231553091861Integrase catalytic regionQuickGO ontologyBLASTP
553088553360273ISEhe3 transposase AQuickGO ontologyBLASTP
553426553665240Transcriptional regulator proteinQuickGO ontologyBLASTP
5538315549881158formyl-CoA transferase-like proteinQuickGO ontologyBLASTP
5550205561831164Acyl-CoA dehydrogenase domain proteinQuickGO ontologyBLASTP
556198556992795Citrate lyase beta subunit putativeQuickGO ontologyBLASTP
556989557807819Hypothetical cytosolic proteinQuickGO ontologyBLASTP
557853558812960AraC-family transcriptional regulatorQuickGO ontologyBLASTP
5590315600831053Putative solute-binding periplasmic proteinQuickGO ontologyBLASTP
5600805620982019hypothetical proteinBLASTP
5620955632671173Beta-lactamase family proteinQuickGO ontologyBLASTP
5632575641839273-hydroxyacyl-CoA dehydrogenase Hdb-1QuickGO ontologyBLASTP