Pre_GI Island

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n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS

NC_015259: Polymorphum gilvum SL003B-26A1 chromosome, complete genome

NCBI: NC_015259

Host Lineage: Polymorphum gilvum; Polymorphum; ; ; Proteobacteria; Bacteria

General Information: Polymorphum gilvum SL003B-26A1 is a type strain of a newly published novel species in the novel genus Polymorphum. It was isolated from a crude oil-polluted saline soil in Shengli Oilfield, China and could use the crude oil as the sole carbon source. Oil pollution has become a global issue because of its severe ecological impact and destruction. Bioremediation is proved to be an effective process to restore the oil polluted environments. The complete genome sequence of Polymorphum gilvum SL003B-26A1 provides new strategies for bioremediation of oil contaminated environment.

Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
1485015*56418379169Island text2.6299826.597823.4963Neighbours11BLASTN+IslandViewer 485015.gbk
2624979*65373428756Island text2.6381924.106523.7558Neighbours11BLASTN+IslandViewer 624979.gbk
3673662*71961445953Island text1.7182221.574520.6542Neighbours11BLASTN+IslandViewer 673662.gbk
473479576624731453Island text1.8308222.290414.3782Neighbours11BLASTN+IslandViewer 734795.gbk
51512563*153812025558Island text1.7620422.764723.1421Neighbours11BLASTN+IslandViewer 1512563.gbk
61803266*182644223177Island text1.6720317.178416.7499Neighbours11BLASTN+IslandViewer 1803266.gbk
72757081*278813031050Island text2.3075822.42716.354Neighbours11BLASTN+IslandViewer 2757081.gbk
83902136392586123726Island text1.7661620.99117.8877Neighbours11BLASTN+IslandViewer 3902136.gbk