Pre_GI Gene

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Host: NC_015177 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015177:2482253 Pedobacter saltans DSM 12145 chromosome, complete genome

Host Lineage: Pedobacter saltans; Pedobacter; Sphingobacteriaceae; Sphingobacteriales; Bacteroidetes; Bacteria

General Information: Country: Iceland; Environment: Marine; Isolation: Soil, Iceland; Temp: Mesophile. Strains of the genus Pedobacter are heparinase-producing, obligately aerobic, Gram-negative rods.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
24822532483245993DNA-directed RNA polymerase subunit alphaQuickGO ontologyBLASTP
24833242483932609SSU ribosomal protein S4PQuickGO ontologyBLASTP
24839932484382390SSU ribosomal protein S11PQuickGO ontologyBLASTP
24843992484776378SSU ribosomal protein S13PQuickGO ontologyBLASTP
24848072484923117LSU ribosomal protein L36PQuickGO ontologyBLASTP
24849282485146219bacterial translation initiation factor 1 bIF-1QuickGO ontologyBLASTP
24852182486000783methionine aminopeptidase type IQuickGO ontologyBLASTP
248600524873361332protein translocase subunit secYsec61 alphaQuickGO ontologyBLASTP
24873402487786447LSU ribosomal protein L15PQuickGO ontologyBLASTP
24877922487971180LSU ribosomal protein L30PQuickGO ontologyBLASTP
24879762488494519SSU ribosomal protein S5PQuickGO ontologyBLASTP
24885072488863357LSU ribosomal protein L18PQuickGO ontologyBLASTP
24888692489426558LSU ribosomal protein L6PQuickGO ontologyBLASTP
24894422489840399SSU ribosomal protein S8PQuickGO ontologyBLASTP
24899132490182270SSU ribosomal protein S14PQuickGO ontologyBLASTP
24901852490742558LSU ribosomal protein L5PQuickGO ontologyBLASTP
24907422491080339LSU ribosomal protein L24PQuickGO ontologyBLASTP
24910822491450369LSU ribosomal protein L14PQuickGO ontologyBLASTP
24914522491706255SSU ribosomal protein S17PQuickGO ontologyBLASTP
24917202491932213LSU ribosomal protein L29PQuickGO ontologyBLASTP
24920032492425423LSU ribosomal protein L16PQuickGO ontologyBLASTP
24924662493239774SSU ribosomal protein S3PQuickGO ontologyBLASTP
24932462493608363LSU ribosomal protein L22PQuickGO ontologyBLASTP
24936162493882267SSU ribosomal protein S19PQuickGO ontologyBLASTP
24938822494706825LSU ribosomal protein L2PQuickGO ontologyBLASTP
24947142495004291LSU ribosomal protein L23PQuickGO ontologyBLASTP
24950062495635630LSU ribosomal protein L4PQuickGO ontologyBLASTP
24956372496254618LSU ribosomal protein L3PQuickGO ontologyBLASTP
24965312497133603hypothetical proteinBLASTP
249718624984391254Prephenate dehydrogenase NADPQuickGO ontologyBLASTP
24986042499071468hypothetical proteinBLASTP
24991432499448306SSU ribosomal protein S10PQuickGO ontologyBLASTP
249957925016962118translation elongation factor 2 EF-2EF-GQuickGO ontologyBLASTP