Pre_GI Gene

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Host: NC_014931 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_014931:6031645 Variovorax paradoxus EPS chromosome, complete genome

Host Lineage: Variovorax paradoxus; Variovorax; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Environment: Soil; Temp: Mesophile. Variovorax paradoxus is a nutritionally diverse organism which is commonly isolated from soil. Strains of this organism are able to degrade a number of compounds such as explosives and pesticides. Variovorax paradoxus is also a plant-growth promoting organism, increasing the resistance of the plant to disease and heavy metals.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
60306596031648990type VI secretion-associated protein BMA_A0400 familyQuickGO ontologyBLASTP
603164560354903846type VI secretion protein IcmFQuickGO ontologyBLASTP
603551560370141500hypothetical proteinBLASTP
60371026037395294PAAR repeat-containing proteinQuickGO ontologyBLASTP
60374556038300846peptidase M15B and M15C DD-carboxypeptidase VanYendolysinQuickGO ontologyBLASTP
60384496039276828hypothetical protein
603930460424383135Rhs element Vgr proteinQuickGO ontologyBLASTP
604243560445042070transmembrane proteinQuickGO ontologyBLASTP
604450460457511248hypothetical proteinBLASTP
60457516046083333hypothetical protein
60467256047210486hypothetical proteinBLASTP
60473426047791450hypothetical protein
604799660495221527AMP-dependent synthetase and ligaseQuickGO ontologyBLASTP
604958560510451461integral membrane sensor signal transduction histidine kinaseQuickGO ontologyBLASTP
605103060523851356two component sigma54 specific transcriptional regulator Fis familyQuickGO ontologyBLASTP
60525366053315780putative secreted proteinQuickGO ontologyBLASTP
605333560546151281major facilitator superfamily MFS_1QuickGO ontologyBLASTP
605461260557571146Citrate transporterQuickGO ontologyBLASTP
60558006056363564hypothetical protein