Pre_GI Gene

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Host: NC_014012 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_014012:2565329 Shewanella violacea DSS12, complete genome

Host Lineage: Shewanella violacea; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Shewanella violacea DSS12 was isolated from mud, taken at a depth of 5110 m, from the Ryukyu Trench in the Philippine Sea. Shewanella violacea is psychrophilic and barophilic, with an optimum growth temperature and pressure of 8 degrees C and 30 MPa, respectively. This organism is able to grow at pressures from 0.1 MPa to 70Mpa, however, no growth occurs a temperatures above 20 degrees C.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
256532925673862058type III secretion system apparatus protein HrcV familyQuickGO ontologyBLASTP
25673832567745363hypothetical protein
256783725696781842hypothetical protein
256981325708411029secretion system apparatus protein ssaL putativeQuickGO ontologyBLASTP
25708732571532660hypothetical protein
25715292572212684hypothetical proteinBLASTP
25722362572967732type III secretion system apparatus lipoproteinQuickGO ontologyBLASTP
25729642573317354hypothetical proteinBLASTP
25733432573663321hypothetical proteinBLASTP
25736842573899216type III secretion system apparatus protein putativeQuickGO ontologyBLASTP
25739102574623714AraC-type DNA-binding domain-containing proteinQuickGO ontologyBLASTP
25749762575194219hypothetical protein
257534725764141068hypothetical protein
25764522577006555type III secretion chaperone putativeQuickGO ontologyBLASTP
257717825785781401hypothetical protein
25785832579047465hypothetical protein
25791582579541384hypothetical proteinBLASTP
25797622580409648hypothetical proteinBLASTP
258041025818941485secretion system effector putativeQuickGO ontologyBLASTP
25818812582354474type III secretion system chaperone SycD familyQuickGO ontologyBLASTP
25823652583180816hypothetical proteinBLASTP
25832202583795576secreted protein EspA putativeQuickGO ontologyBLASTP
25838422584231390hypothetical protein
25843232584514192hypothetical protein
258452425857321209type III secretion system apparatus protein YscDHrpQ familyQuickGO ontologyBLASTP