Pre_GI Gene

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Host: NC_014012 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_014012:1676983 Shewanella violacea DSS12, complete genome

Host Lineage: Shewanella violacea; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Shewanella violacea DSS12 was isolated from mud, taken at a depth of 5110 m, from the Ryukyu Trench in the Philippine Sea. Shewanella violacea is psychrophilic and barophilic, with an optimum growth temperature and pressure of 8 degrees C and 30 MPa, respectively. This organism is able to grow at pressures from 0.1 MPa to 70Mpa, however, no growth occurs a temperatures above 20 degrees C.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
167698316797422760polysaccharide biosynthesis proteinQuickGO ontologyBLASTP
16803801681339960chain length determinant proteinQuickGO ontologyBLASTP
16814261681917492GDP-mannose mannosyl hydrolaseQuickGO ontologyBLASTP
168192016833201401mannose-1-phosphate guanylyltransferaseQuickGO ontologyBLASTP
168333016847541425phosphomannomutaseQuickGO ontologyBLASTP
168483616859631128GDP-mannose 46-dehydrataseQuickGO ontologyBLASTP
16862231686492270hypothetical proteinBLASTP
16866761687179504hypothetical proteinBLASTP
168757616888201245polysaccharide biosynthesis family proteinQuickGO ontologyBLASTP
16888661689621756glycosyl transferase group 2 family proteinQuickGO ontologyBLASTP
168974216908841143glycosyl transferase putativeQuickGO ontologyBLASTP
169087716918811005GDP-mannose 46-dehydrataseQuickGO ontologyBLASTP
169233216934501119GDP-mannose 46-dehydrataseQuickGO ontologyBLASTP
16934531694415963GDP-L-fucose synthetaseQuickGO ontologyBLASTP
169442016954661047dTDP-glucose 46-dehydrataseQuickGO ontologyBLASTP
16954691696341873glucose-1-phosphate-thymidylyltransferaseQuickGO ontologyBLASTP
16963381696745408hypothetical proteinBLASTP
16967351697184450acetyltransferase putativeQuickGO ontologyBLASTP
169718116982841104aminotransferase putativeQuickGO ontologyBLASTP
169852016996981179hypothetical proteinBLASTP
169980417010061203hypothetical protein
170125617030221767acyltransferase family proteinQuickGO ontologyBLASTP
17030941703987894glycosyl transferase group 2 family proteinQuickGO ontologyBLASTP
17040421704809768glycosyl transferase group 2 family proteinQuickGO ontologyBLASTP
17048061705723918UDP-glucose 4-epimerase putativeQuickGO ontologyBLASTP