Pre_GI Gene

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Host: NC_014006 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_014006:3124818 Sphingobium japonicum UT26S chromosome 1, complete genome

Host Lineage: Sphingobium japonicum; Sphingobium; Sphingomonadaceae; Sphingomonadales; Proteobacteria; Bacteria

General Information: Sphingobium japonicum (strain NBRC 101211 / UT26S) is a yellow-pigmented, non-motile, aerobic, hexachlorocyclohexane (HCH)-degrading Gram-negative bacterium isolated from a dumpsite in the vicinity of an industry that has been producing lindane. HCH has been used extensively as insect control agents in the health and agriculture fields. Sphingobium japonicum, formerly Sphingomonas paucimobilis, is able to degrade hexachlorocyclohexane which has been used extensively as insect control agents in the health and agriculture fields.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
31248183125183366hypothetical protein
31253863126216831putative permeaseQuickGO ontologyBLASTP
31262653126441177hypothetical protein
312659531277281134alanine dehydrogenaseQuickGO ontologyBLASTP
31278023128731930peptidyl-prolyl cis-trans isomeraseQuickGO ontologyBLASTP
3128783312887593tRNA-SerQuickGO ontology
312905231302481197putative integraseQuickGO ontologyBLASTP
313026331322031941adenine-specific DNA-methyltransferaseQuickGO ontologyBLASTP
31323783132620243Xre-family transcriptional regulatorQuickGO ontologyBLASTP
31327643133621858hypothetical protein
31340193134633615hypothetical protein
31347353135136402hypothetical protein
31351673135421255hypothetical protein
31354183135720303hypothetical protein
31358363136162327hypothetical protein
313622131374411221hypothetical proteinBLASTP
31375463137764219putative excisionaseQuickGO ontologyBLASTP
31377963138467672hypothetical protein
31387343138925192hypothetical protein
31389763139506531glyoxalase-family proteinQuickGO ontologyBLASTP
31395713140419849putative alphabeta hydrolaseQuickGO ontologyBLASTP
31404703141288819SDR-family proteinQuickGO ontologyBLASTP
31413903142250861LysR-family transcriptional regulatorQuickGO ontologyBLASTP
31422713142852582hypothetical proteinBLASTP
31429653143606642hypothetical proteinBLASTP
31435963144207612ECF-type sigma factorQuickGO ontologyBLASTP
31443403145128789SDR-family proteinQuickGO ontologyBLASTP
31451253145454330hypothetical proteinBLASTP
31455513146444894LysR-family transcriptional regulatorQuickGO ontologyBLASTP
314715131493312181hemolysin secretion protein HlyBQuickGO ontologyBLASTP
314932831507191392HlyD-family secretion proteinQuickGO ontologyBLASTP
31507673151297531hemolysin-activating lysine-acyltransferase HlyCQuickGO ontologyBLASTP
31512883151668381Sel1-like TPR repeat proteinQuickGO ontology
31516523152242591hypothetical protein
31525313152731201hypothetical protein
3154307316678612480putative Ca2-binding hemolysinQuickGO ontologyBLASTP
31667883167492705hypothetical proteinBLASTP
316750231703452844conjugal transfer protein TraAQuickGO ontologyBLASTP