Pre_GI Gene

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Host: NC_013929 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013929:2375613 Streptomyces scabiei 87.22 chromosome, complete genome

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
237561323771361524cationic amino acid transporterQuickGO ontologyBLASTP
2377282237920119201-deoxy-D-xylulose-5-phosphate synthaseQuickGO ontologyBLASTP
237954123808631323ABC transporterQuickGO ontologyBLASTP
23808692381660792ABC transporterQuickGO ontologyBLASTP
238187323829641092solute-binding proteinQuickGO ontologyBLASTP
238310123843121212transcriptional repressorQuickGO ontologyBLASTP
23845032385438936transporterQuickGO ontologyBLASTP
23854562386385930ABC transporterQuickGO ontologyBLASTP
238654623880181473extracellular solute-binding receptorQuickGO ontologyBLASTP
238873023925423813mannosidaseQuickGO ontologyBLASTP
239261223936851074cellulosechitin binding proteinQuickGO ontologyBLASTP
23939442394543600hypothetical protein
239458923973062718aconitate hydrataseQuickGO ontologyBLASTP
23977722398107336BLASTP
23986022398799198hypothetical proteinBLASTP
239890224004311530UDP-N-acetylglucosamine transferaseQuickGO ontologyBLASTP
240057824017981221phage integraseQuickGO ontologyBLASTP
24018792402190312hypothetical protein
24024112402581171hypothetical protein
2403319240340082tRNA-ArgQuickGO ontology
240353024050051476mobile element proteinQuickGO ontologyBLASTP
240621224077801569hypothetical proteinBLASTP
240778024091981419hypothetical proteinBLASTP
240919524135144320hypothetical proteinBLASTP
241351124148421332hypothetical proteinBLASTP
241503824161891152serinethreonine protein kinaseQuickGO ontologyBLASTP
241641224193752964helicaseQuickGO ontologyBLASTP
241937224248975526hypothetical proteinBLASTP
242489424316166723RNA helicaseQuickGO ontologyBLASTP
243161324339072295helicaseQuickGO ontologyBLASTP
24341672434541375hypothetical protein
243484124358961056hypothetical proteinBLASTP
24362652436579315hypothetical protein
24374952437713219hypothetical proteinBLASTP
24382152438769555hypothetical proteinBLASTP
243877524400071233regulatory proteinQuickGO ontologyBLASTP
244057324418441272glutamyl-tRNA synthetaseQuickGO ontologyBLASTP
24418492442682834hypothetical proteinBLASTP
24426822443227546hypothetical proteinBLASTP
244344924446391191hypothetical proteinBLASTP
24446482444836189hypothetical protein
24464212446972552hypothetical proteinBLASTP
24478412448506666hypothetical proteinBLASTP
24490572449191135hypothetical protein
24495132449680168hypothetical protein
24497412450487747nucleotide-sugar handling proteinQuickGO ontologyBLASTP
24505052451197693deoxygenaseQuickGO ontologyBLASTP
245123024522371008glycosyltransferaseQuickGO ontologyBLASTP
245223424532891056hypothetical protein
245330724545181212pyruvyl-transferaseQuickGO ontologyBLASTP
245463224556541023carbohydrate epimeraseQuickGO ontologyBLASTP
24556152456406792haloacid dehalogenase-like hydrolaseQuickGO ontologyBLASTP
24564032457302900glycosyl hydrolaseQuickGO ontologyBLASTP
245729924583001002glycosyl hydrolaseQuickGO ontologyBLASTP
24583112459141831rRNA methyltransferaseQuickGO ontologyBLASTP
24593112460084774phosphotransferaseQuickGO ontologyBLASTP
246017724615411365hypothetical proteinBLASTP
24617692462479711hydrolaseQuickGO ontologyBLASTP
246249124638881398hypothetical proteinBLASTP