Pre_GI Gene

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Host: NC_013716 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013716:3327881 Citrobacter rodentium ICC168, complete genome

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
332662233278841263putative extradiol dioxygenaseQuickGO ontologyBLASTP
332788133291071227putative LysR-family transcriptional regulatorQuickGO ontologyBLASTP
33292363329976741putative DNA binding proteinQuickGO ontologyBLASTP
33299733330686714putative methyl transferaseQuickGO ontologyBLASTP
333068833317701083hypothetical proteinBLASTP
33317703332645876putative dehydrodgenaseQuickGO ontologyBLASTP
33326503332997348putative anti-adapter protein IraMQuickGO ontologyBLASTP
33346063335229624hypothetical protein
33366153337115501putative phage tail fibre proteinQuickGO ontologyBLASTP
33398033340381579T3SS effector protein EspM3QuickGO ontologyBLASTP
3341223335129610074LifA-like proteinQuickGO ontologyBLASTP
33575083358185678ISCro1 transposase AQuickGO ontologyBLASTP
33581853358532348ISCro1 transposase BQuickGO ontologyBLASTP
335855233601231572ISCro1 transposase CQuickGO ontologyBLASTP
336037133622961926hypothetical proteinBLASTP
336230633642791974hypothetical proteinBLASTP
33642763364929654hypothetical proteinBLASTP