Pre_GI Gene

Some Help

Host: NC_013716 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013716:2476334 Citrobacter rodentium ICC168, complete genome

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
247633424770627293-demethylubiquinone-9 3-methyltransferaseQuickGO ontologyBLASTP
247744324797282286ribonucleoside-diphosphate reductase 1 alpha chainQuickGO ontologyBLASTP
247984324809731131ribonucleoside-diphosphate reductase 1 beta chainQuickGO ontologyBLASTP
24809732481227255putative ferredoxinQuickGO ontologyBLASTP
24815202481786267hypothetical protein
24817992482197399hypothetical proteinBLASTP
24824562482866411hypothetical proteinBLASTP
248305624846271572ISCro1 transposase CQuickGO ontologyBLASTP
24846472484994348ISCro1 transposase BQuickGO ontologyBLASTP
24849942485671678ISCro1 transposase AQuickGO ontologyBLASTP
24857272486161435BLASTP
24861682486542375hypothetical protein
24873942488071678hypothetical proteinBLASTP
24883712489297927LysR-family transcriptional regulatorQuickGO ontologyBLASTP
24893872490385999putative outer membrane proteinQuickGO ontologyBLASTP
24903822490609228hypothetical proteinBLASTP
249060224926172016DNA ligaseQuickGO ontologyBLASTP
24926892493684996cell division proteinQuickGO ontologyBLASTP
24939152494676762putative sulfate transport proteinQuickGO ontologyBLASTP
24948402495811972cysteine synthase AQuickGO ontologyBLASTP
24961932496450258phosphocarrier protein HPrQuickGO ontologyBLASTP
249649724982241728phosphoenolpyruvate-protein phosphotransferaseQuickGO ontologyBLASTP