Pre_GI: BLASTP Hits

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Query: NC_013716:2476334:2487394 Citrobacter rodentium ICC168, complete genome

Start: 2487394, End: 2488071, Length: 678

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020260:882307:888322888322888930609Cronobacter sakazakii Sp291, complete genomehypothetical protein1e-1066.6
NC_013282:551219:575194575194575730537Cronobacter turicensis, complete genomehypothetical protein2e-1065.9
NC_020064:521500:550456550456550989534Serratia marcescens FGI94, complete genomehypothetical protein3e-1065.1
NC_020260:3355814:337573133757313376267537Cronobacter sakazakii Sp291, complete genomehypothetical protein3e-1065.1
NC_014310:785220:7986037986038019473345Ralstonia solanacearum PSI07 megaplasmid, complete sequencerhs element vgr-like protein8e-1063.9
NC_015856:4301230:4310019431001943112871269Collimonas fungivorans Ter331 chromosome, complete genomeRhs element Vgr protein6e-0754.3
NC_016816:3952000:397080639708063971309504Pantoea ananatis LMG 5342, complete genomehypothetical protein9e-0753.9
NC_006350:2427000:2443535244353524468703336Burkholderia pseudomallei K96243 chromosome 1, complete sequencehypothetical protein1e-0653.1
NC_007651:3064530:3085793308579330891283336Burkholderia thailandensis E264 chromosome I, complete sequenceRhs element Vgr protein, putative2e-0652.8