Pre_GI Gene

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Host: NC_013716 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013716:2255102 Citrobacter rodentium ICC168, complete genome

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
225380122551051305histidinol dehydrogenaseQuickGO ontologyBLASTP
225510222561811080histidinol-phosphate aminotransferaseQuickGO ontologyBLASTP
225617822572451068histidine biosynthesis bifunctional protein includes histidinol-phosphatase imidazoleglycerol-phosphat dehydrataseQuickGO ontologyBLASTP
22572452257835591imidazole glycerol phosphate synthase subunitQuickGO ontologyBLASTP
225783522585727381-5-phosphoribosyl-5-5-phosphoribosylamino methylideneamino imidazole-4-carboxamide isomeraseQuickGO ontologyBLASTP
22585542259330777imidazole glycerol phosphate synthase subunitQuickGO ontologyBLASTP
22593242259935612histidine biosynthesis bifunctional proteinQuickGO ontologyBLASTP
22600182261004987chain length determinant proteinQuickGO ontologyBLASTP
226115322623191167UDP-glucose 6-dehydrogenaseQuickGO ontologyBLASTP
2262556226396214076-phosphogluconate dehydrogenase decarboxylatingQuickGO ontologyBLASTP
226407022651401071glycosyltransferase WfaOQuickGO ontologyBLASTP
22651372265898762glycosyltransferase WfaPQuickGO ontologyBLASTP
226590322669761074putative O-antigen polymerase WzyQuickGO ontologyBLASTP
22669892267981993hypothetical proteinBLASTP
226798422691951212putative O-antigen transporterQuickGO ontologyBLASTP
226919222702321041hypothetical proteinBLASTP
22702482270796549dTDP-4-dehydrorhamnose 35-epimeraseQuickGO ontologyBLASTP
22708012271679879glucose-1-phosphate thymidylyltransferaseQuickGO ontologyBLASTP
22717312272630900dTDP-4-dehydrorhamnose reductaseQuickGO ontologyBLASTP
227263022737151086dTDP-glucose 46-dehydrataseQuickGO ontologyBLASTP
22740892274982894UTP-glucose-1-phosphate uridylyltransferaseQuickGO ontologyBLASTP
227516122765641404colanic acid biosynthesis proteinQuickGO ontologyBLASTP
227657522777951221putative colanic acid biosynthesis glycosyl transferaseQuickGO ontologyBLASTP
227779222790721281putative colanic acid biosynthesis pyruvyl transferaseQuickGO ontologyBLASTP
227913122806091479putative flippaseQuickGO ontologyBLASTP
228061122820051395putative colanic biosynthesis UDP-glucose lipid carrier transferaseQuickGO ontologyBLASTP
228206022834301371phosphomannomutaseQuickGO ontologyBLASTP
228359022850261437mannose-1-phosphate guanylyltransferaseQuickGO ontologyBLASTP