Pre_GI Gene

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Host: NC_013716 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013716:1178383 Citrobacter rodentium ICC168, complete genome

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
117838311798911509sodiumproline symporter proline permeaseQuickGO ontologyBLASTP
11802411180966726ferrous iron permeaseQuickGO ontologyBLASTP
118102311821501128hypothetical proteinBLASTP
118215611834271272putative peroxidaseQuickGO ontologyBLASTP
11851701185379210BLASTP
11853971185615219BLASTP
118625211878981647putative T3SS effector EspL2QuickGO ontologyBLASTP
11887851189279495BLASTP
11892911189626336BLASTP
11898911190355465BLASTP
11906111191600990T3SS effector protein NleB1QuickGO ontologyBLASTP
11916431192335693T3SS effector protein NleEQuickGO ontologyBLASTP
11935251193809285hypothetical proteinBLASTP
1194891119497585tRNA-SerQuickGO ontologyBLASTP
11952091196147939putative 2-hydroxyacid dehydrogenaseQuickGO ontologyBLASTP
11962801197017738putative phosphoesteraseQuickGO ontologyBLASTP
11970411197595555putative chaperoneQuickGO ontologyBLASTP
11976471198177531hypothetical proteinBLASTP
11982371199070834curli production assemblytransport componentQuickGO ontologyBLASTP
11990961199512417curli production assemblytransport componentQuickGO ontologyBLASTP
11995391199928390curli production assemblytransport componentQuickGO ontologyBLASTP
11999331200583651probable CsgAB operon transcriptional regulatorQuickGO ontologyBLASTP
12013271201782456minor curlin subunitQuickGO ontologyBLASTP
12018231202278456major curlin subunitQuickGO ontologyBLASTP
12023401202672333putative curli production protein csgc precursorQuickGO ontologyBLASTP
12027981203121324hypothetical proteinBLASTP
12031811203744564putative DNA andor RNA unwinding proteinQuickGO ontologyBLASTP
120374612051671422putative phospholipaseQuickGO ontologyBLASTP