Pre_GI: BLASTP Hits

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Query: NC_013716:1178383:1197647 Citrobacter rodentium ICC168, complete genome

Start: 1197647, End: 1198177, Length: 531

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011147:1763681:176607317660731766603531Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein2e-70265
NC_006511:1770000:177089017708901771420531Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein2e-70265
NC_006905:1186895:120754212075421208072531Salmonella enterica subsp. enterica serovar Choleraesuis strputative inner membrane protein2e-70264
NC_008258:1076922:109450910945091095048540Shigella flexneri 5 str. 8401, complete genomehypothetical protein2e-70264
NC_003198:1117687:113773211377321138262531Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein5e-70263
NC_004631:1842050:184292118429211843451531Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein5e-70263
NC_016810:1163919:118359611835961184126531Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein5e-70263
NC_016856:1165941:118561811856181186148531Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative inner membrane protein5e-70263
NC_016857:1163919:118359611835961184126531Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative inner membrane protein5e-70263
NC_016863:1165232:118490911849091185439531Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative inner membrane protein5e-70263
NC_011294:2009388:201070320107032011233531Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein1e-69261
NC_003197:1207597:122745612274561227986531Salmonella typhimurium LT2, complete genomeputative inner membrane protein5e-69259
NC_010102:1979742:198061419806141981138525Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-68258
NC_017046:1164176:118367511836751184199525Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein9e-69258
NC_004337:1065609:107514710751471075668522Shigella flexneri 2a str. 301, complete genomehypothetical protein5e-68256
NC_010468:2809125:280912528091252809646522Escherichia coli ATCC 8739, complete genomeprotein of unknown function DUF10975e-68256
NC_016831:947281:990494990494991018525Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein1e-67255
NC_011094:1166271:118578111857811186293513Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein9e-68255
NC_011205:2137696:213901121390112139523513Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein3e-67254
NC_016832:1838220:183995618399561840450495Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Inner membrane protein ycdZ8e-67252
NC_011083:1216500:123184112318411232335495Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,inner membrane protein YcdZ8e-67252
NC_011080:1209935:122927912292791229773495Salmonella enterica subsp. enterica serovar Newport str. SL254,inner membrane protein YcdZ2e-66251
NC_010067:1782998:178385117838511784345495Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein3e-66250
NC_016860:1205282:122517812251781225672495Salmonella enterica subsp. enterica serovar Typhimurium strinner membrane protein YcdZ1e-65248
NC_012125:2646792:264766326476632648157495Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein2e-65248
NC_015968:1709680:171560017156001716091492Enterobacter asburiae LF7a chromosome, complete genomehypothetical protein2e-64244
NC_000913:1087062:109951910995191100010492Escherichia coli K12, complete genomepredicted inner membrane protein8e-64242
AC_000091:1083798:110053711005371101028492Escherichia coli W3110 DNA, complete genomepredicted inner membrane protein8e-64242
NC_016514:1701273:170536817053681705898531Enterobacter cloacae EcWSU1 chromosome, complete genomeinner membrane protein YcdZ3e-63240
NC_015663:3466471:350172135017213502203483Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein4e-59227
NC_015224:3191000:319178131917813192272492Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,hypothetical protein5e-58223
NC_008800:1497746:151399715139971514488492Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,hypothetical protein4e-55213
NC_014121:2629075:264431826443182644740423Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein3e-52204
NC_009778:2227627:223568722356872236163477Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein5e-39160
NC_015425:405058:408528408528408995468Clostridium botulinum BKT015925 chromosome, complete genomeglutathione-regulated potassium-efflux system protein2e-21101