Pre_GI Gene

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Host: NC_013552 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013552:1240073 Dehalococcoides sp. VS, complete genome

Host Lineage: Dehalococcoides mccartyi; Dehalococcoides; Dehalococcoidaceae; Dehalococcoidales; Chloroflexi; Bacteria

General Information: Isolation: Texas; Country: USA; Temp: Mesophile; Habitat: Fresh water, Groundwater. This organism was isolated from environments contaminated with organic chlorinated chemicals such as tetrachloroethene (PCE) and trichloroethane (TCE), common contaminants in the anaerobic subsurface. There are at least 15 organisms from different metabolic groups, halorespirators, acetogens, methanogens and facultative anaerobes, that are able to metabolize PCE. Some of these organisms couple dehalogenation to energy conservation and utilize PCE as the only source of energy while others dehalogenate tetrachloroethene fortuitously. This non-methanogenic, non-acetogenic culture is able to grow with hydrogen as the electron donor, indicating that hydrogen/PCE serves as an electron donor/acceptor for energy conservation and growth. This organism can only grow anaerobically in the presence of hydrogen as an electron donor and chlorinated compounds as electron acceptors. Dehalococcoides ethenogenes is typically found at sites contaminated with chlorinated solvents, and have been independently isolated in dozens of sites across the USA.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
124007312415151443reductive dehalogenaseQuickGO ontologyBLASTP
12416501241922273reductive dehalogenase anchoring proteinQuickGO ontologyBLASTP
124195112433721422reductive dehalogenaseQuickGO ontologyBLASTP
12435341243806273reductive dehalogenase anchoring proteinQuickGO ontologyBLASTP
124383512453011467reductive dehalogenaseQuickGO ontologyBLASTP
12458971246154258hypothetical protein
12462401246404165hypothetical protein
124680812480971290reductive dehalogenaseQuickGO ontologyBLASTP
12483781248653276reductive dehalogenase anchoring proteinQuickGO ontologyBLASTP
124869212500771386reductive dehalogenaseQuickGO ontologyBLASTP
12501771250374198hypothetical protein
12503781250806429transcriptional regulator MerR family CueR domain proteinQuickGO ontologyBLASTP
12512011251473273reductive dehalogenase anchoring proteinQuickGO ontologyBLASTP
125149712530411545reductive dehalogenaseQuickGO ontologyBLASTP
125329712545771281sensor histidine kinaseQuickGO ontologyBLASTP
12545741255251678DNA-binding response regulatorQuickGO ontologyBLASTP
12554251256192768CbiZ domain proteinQuickGO ontologyBLASTP
12565061256976471hypothetical proteinBLASTP
12569761257278303hypothetical proteinBLASTP
12573361257632297reductive dehalogenase anchoring proteinQuickGO ontology
125763412592321599reductive dehalogenaseQuickGO ontologyBLASTP
12595161259995480transcriptional regulator MarR familyQuickGO ontologyBLASTP
12602481260580333sensor histidine kinaseQuickGO ontology
12609491261236288reductive dehalogenase anchoring proteinQuickGO ontologyBLASTP
126125812628141557reductive dehalogenaseQuickGO ontologyBLASTP
12630641263534471transcriptional regulator MarR familyQuickGO ontologyBLASTP