Pre_GI: BLASTP Hits

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Query: NC_013552:1240073:1259516 Dehalococcoides sp. VS, complete genome

Start: 1259516, End: 1259995, Length: 480

Host Lineage: Dehalococcoides mccartyi; Dehalococcoides; Dehalococcoidaceae; Dehalococcoidales; Chloroflexi; Bacteria

General Information: Isolation: Texas; Country: USA; Temp: Mesophile; Habitat: Fresh water, Groundwater. This organism was isolated from environments contaminated with organic chlorinated chemicals such as tetrachloroethene (PCE) and trichloroethane (TCE), common contaminants in the anaerobic subsurface. There are at least 15 organisms from different metabolic groups, halorespirators, acetogens, methanogens and facultative anaerobes, that are able to metabolize PCE. Some of these organisms couple dehalogenation to energy conservation and utilize PCE as the only source of energy while others dehalogenate tetrachloroethene fortuitously. This non-methanogenic, non-acetogenic culture is able to grow with hydrogen as the electron donor, indicating that hydrogen/PCE serves as an electron donor/acceptor for energy conservation and growth. This organism can only grow anaerobically in the presence of hydrogen as an electron donor and chlorinated compounds as electron acceptors. Dehalococcoides ethenogenes is typically found at sites contaminated with chlorinated solvents, and have been independently isolated in dozens of sites across the USA.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007356:1221500:124168612416861242198513Dehalococcoides sp. CBDB1, complete genometranscriptional regulator, MarR family1e-0755.8
NC_013552:1240073:126306412630641263534471Dehalococcoides sp. VS, complete genometranscriptional regulator, MarR family1e-0755.8
NC_007356:1165760:119502111950211195560540Dehalococcoides sp. CBDB1, complete genometranscriptional regulator, MarR family4e-0753.9
NC_016048:351205:367385367385367822438Oscillibacter valericigenes Sjm18-20, complete genomeputative MarR family transcriptional regulator1e-0652
NC_013552:1187299:122367812236781224187510Dehalococcoides sp. VS, complete genometranscriptional regulator, MarR family8e-0649.7
NC_015760:61345:806518065181079429Streptococcus salivarius CCHSS3, complete genomemultidrug resistance operon repressor8e-0649.7