Pre_GI Gene

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Host: NC_013361 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013361:1896446 Escherichia coli O26:H11 str. 11368 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli O26:H11 str. 11368 is a human enterohemorrhagic E. coli which attaches to and effaces cells in the large intestine. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
18962431896449207head-tail joining proteinQuickGO ontologyBLASTP
189644618980471602portal proteinQuickGO ontologyBLASTP
189802818993471320head proteinprohead proteaseQuickGO ontologyBLASTP
18993511899689339head-DNA stabilization proteinQuickGO ontologyBLASTP
189974519007701026major capsid proteinQuickGO ontologyBLASTP
19008121901207396DNA packaging proteinQuickGO ontologyBLASTP
19012191901572354minor tail proteinQuickGO ontologyBLASTP
19015841902162579minor tail proteinQuickGO ontologyBLASTP
19021591902554396minor tail proteinQuickGO ontologyBLASTP
19025621903314753major tail proteinQuickGO ontologyBLASTP
19033281903759432minor tail proteinQuickGO ontologyBLASTP
19038101904199390minor tail proteinQuickGO ontologyBLASTP
190418019067592580tail length tape measure proteinQuickGO ontologyBLASTP
19067561907085330minor tail proteinQuickGO ontologyBLASTP
19070851907783699minor tail proteinQuickGO ontologyBLASTP
19077891908532744tail assembly proteinQuickGO ontologyBLASTP
19084301909110681tail assembly proteinQuickGO ontologyBLASTP
190935619128323477host specificity proteinQuickGO ontologyBLASTP
19129001913499600outer membrane precursor LomQuickGO ontologyBLASTP
191356419148771314side tail fiber proteinQuickGO ontologyBLASTP
19148791915148270hypothetical proteinBLASTP
19152611915836576T3SS effector NleGQuickGO ontologyBLASTP
19159091916538630T3SS effector NleGQuickGO ontologyBLASTP
19166201917261642T3SS effector NleGQuickGO ontologyBLASTP
19182021918636435stress-induced protein ATP-binding proteinQuickGO ontologyBLASTP
191877719199101134outer membrane pore protein NQuickGO ontologyBLASTP