Pre_GI Gene

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Host: NC_013353 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013353:5361207 Escherichia coli O103:H2 str. 12009, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
53612075362238103216S rRNA m2G1207 methylase RsmCQuickGO ontologyBLASTP
53623415362754414DNA polymerase III psi subunitQuickGO ontologyBLASTP
53627235363169447acetylase for 30S ribosomal subunit protein S18QuickGO ontologyBLASTP
53631845363861678hydrolaseQuickGO ontologyBLASTP
536424653654691224integraseQuickGO ontologyBLASTP
536587953671891311hypothetical proteinBLASTP
53676165367996381hypothetical proteinBLASTP
53679935368811819hypothetical proteinBLASTP
53688085369323516hypothetical proteinBLASTP
53693255370095771hypothetical proteinBLASTP
53700925370313222C4-type zinc finger proteinQuickGO ontologyBLASTP
53704125370627216hypothetical proteinBLASTP
5370624537070784hypothetical proteinBLASTP
53707045370895192hypothetical proteinBLASTP
53708685371050183hypothetical proteinBLASTP
53710475371727681exonucleaseQuickGO ontologyBLASTP
53717245372509786recombinaseQuickGO ontologyBLASTP
53725155372811297host-nuclease inhibitor proteinQuickGO ontologyBLASTP
53728875373156270host killing proteinQuickGO ontologyBLASTP
53733555373825471hypothetical proteinBLASTP
53738845374267384early gene regulator NQuickGO ontologyBLASTP
53747565374920165hypothetical proteinBLASTP
537492353759691047serinethreonine kinaseQuickGO ontologyBLASTP
53759635376424462hypothetical proteinBLASTP
53764925376833342hypothetical proteinBLASTP
53768945377601708phage repressor protein CIQuickGO ontologyBLASTP
53776805377907228antirepressor protein CroQuickGO ontologyBLASTP
53780465378342297phage regulatory protein CIIQuickGO ontologyBLASTP
53783755379313939replication proteinQuickGO ontologyBLASTP
53793105380011702replication proteinQuickGO ontologyBLASTP
53800085380298291exclusion proteinQuickGO ontologyBLASTP