Pre_GI Gene

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Host: NC_013223 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013223:1349000 Desulfohalobium retbaense DSM 5692, complete genome

Host Lineage: Desulfohalobium retbaense; Desulfohalobium; Desulfohalobiaceae; Desulfovibrionales; Proteobacteria; Bacteria

General Information: Isolation: Saline sediment from Retba Lake in Senegal; Temp: Mesophile; Temp: 35C. This organism is a moderately halophilic sulfate-reducing bacterium which was originally isolated from a hypersaline lake in Africa.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
13491501349818669methyltransferase type 12QuickGO ontologyBLASTP
135048313518681386D-serine ammonia-lyaseQuickGO ontologyBLASTP
135241613546922277PASPAC sensor hybrid histidine kinaseQuickGO ontologyBLASTP
135484413576542811diguanylate cyclasephosphodiesterase with PASPAC sensorsQuickGO ontologyBLASTP
135779813592401443AAA ATPaseQuickGO ontologyBLASTP
13592461359803558hypothetical proteinBLASTP
13599801360948969OmpAMotB domain proteinQuickGO ontologyBLASTP
136105813626261569TPR repeat-containing proteinQuickGO ontologyBLASTP
13627461363693948TPR repeat-containing proteinQuickGO ontologyBLASTP
13637731364735963Type II secretion system F domain proteinQuickGO ontologyBLASTP
13649141365885972Type II secretion system F domain proteinQuickGO ontologyBLASTP
136592613673351410type II secretion system protein EQuickGO ontologyBLASTP
136745013686191170response regulator receiver proteinQuickGO ontologyBLASTP
13687101369681972Protein of unknown function DUF2134 membraneQuickGO ontologyBLASTP
13697001370107408TadE family proteinQuickGO ontologyBLASTP
13701361370567432TadE family proteinQuickGO ontologyBLASTP
13707711371085315hypothetical protein
137122313725901368type II and III secretion system proteinQuickGO ontologyBLASTP
13726621373549888Flp pilus assembly protein CpaBQuickGO ontologyBLASTP
137403013753671338transposase IS4 family proteinQuickGO ontologyBLASTP
13754941376063570peptidase A24A prepilin type IVQuickGO ontologyBLASTP
13760791376249171FlpFap pilin componentQuickGO ontology
13763461376516171FlpFap pilin componentQuickGO ontology
13770881378047960glycosyl transferase family 2QuickGO ontologyBLASTP
137816413793901227transposase IS204IS1001IS1096IS1165 family proteinQuickGO ontologyBLASTP
137962313811221500IstA2QuickGO ontologyBLASTP
13811191381877759IstB domain protein ATP-binding proteinQuickGO ontologyBLASTP