Pre_GI Gene

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Host: NC_013093 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013093:4247811 Actinosynnema mirum DSM 43827, complete genome

Host Lineage: Actinosynnema mirum; Actinosynnema; Pseudonocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Isolation: Blade of grass from Raritan River NJ; Country: USA; Temp: Mesophile; Temp: 10-30C; Habitat: Soil. This bacterium produces the antibiotic nocardicin A. Soil dwelling, nonmotile aerobe it has fine hyphae which form aerial and substrate mycelia. Motile spores are borne on synnemata, compact groups of erect hyphae. It produces nocardicin antibiotics and is able to inhibit growth of several Gram-positive bacteria as well as some filamentous fungi and yeasts.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
42478114248650840hypothetical protein
42487624249604843hypothetical protein
42498384250398561BLASTP
42505594251267709BLASTP
42515294252179651hypothetical protein
42523504252796447hypothetical protein
425277742546781902hypothetical protein
42549394255286348hypothetical proteinBLASTP
425528342568301548hypothetical proteinBLASTP
42574714257653183hypothetical protein
42576504257967318transcription factor WhiBQuickGO ontologyBLASTP
42579974258284288hypothetical proteinBLASTP
42582934258907615BLASTP
425890442609312028cell divisionFtsKSpoIIIEQuickGO ontologyBLASTP
42609934261898906helix-turn-helix domain proteinQuickGO ontology
42618954262167273hypothetical proteinBLASTP
42623254263176852transcriptional regulator XRE familyQuickGO ontologyBLASTP
42632184263445228protein of unknown function DUF397QuickGO ontologyBLASTP
426363642650211386hypothetical proteinBLASTP
42650244265683660HAD-superfamily hydrolase subfamily IA variant 1QuickGO ontologyBLASTP
42660804266694615hypothetical proteinBLASTP
42666404267470831EndonucleaseexonucleasephosphataseQuickGO ontologyBLASTP
426746742685191053aldoketo reductaseQuickGO ontologyBLASTP
426868142708162136Radical SAM domain proteinQuickGO ontologyBLASTP