Pre_GI Gene

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Host: NC_013093 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013093:2895511 Actinosynnema mirum DSM 43827, complete genome

Host Lineage: Actinosynnema mirum; Actinosynnema; Pseudonocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Isolation: Blade of grass from Raritan River NJ; Country: USA; Temp: Mesophile; Temp: 10-30C; Habitat: Soil. This bacterium produces the antibiotic nocardicin A. Soil dwelling, nonmotile aerobe it has fine hyphae which form aerial and substrate mycelia. Motile spores are borne on synnemata, compact groups of erect hyphae. It produces nocardicin antibiotics and is able to inhibit growth of several Gram-positive bacteria as well as some filamentous fungi and yeasts.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
28955112896290780Pectate lyaseQuickGO ontologyBLASTP
28965002897438939Ornithine cyclodeaminaseQuickGO ontologyBLASTP
289741428985081095alanine racemase domain proteinQuickGO ontologyBLASTP
28985052899167663YheO domain proteinQuickGO ontologyBLASTP
289928029003591080putative acyl-CoA dehydrogenase-related proteinQuickGO ontologyBLASTP
290034429016271284LmbE family proteinQuickGO ontologyBLASTP
29016242902307684glycosyl transferase family 2QuickGO ontologyBLASTP
29023642902942579GCN5-related N-acetyltransferaseQuickGO ontologyBLASTP
29032172904017801Pectate lyaseQuickGO ontologyBLASTP
29045042905340837binding-protein-dependent transport systems inner membrane componentQuickGO ontologyBLASTP
29053482906199852binding-protein-dependent transport systems inner membrane componentQuickGO ontologyBLASTP
290625029075991350extracellular solute-binding protein family 1QuickGO ontologyBLASTP
290768429092221539Alpha-N-arabinofuranosidaseQuickGO ontologyBLASTP
290921529109541740Beta-galactosidaseQuickGO ontologyBLASTP
291111229121521041transcriptional regulator LacI familyQuickGO ontologyBLASTP
291227229135341263hypothetical protein
29135272914147621RNA polymerase sigma-24 subunit ECF subfamilyQuickGO ontologyBLASTP
291441129182863876hypothetical proteinBLASTP