Pre_GI Gene

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Host: NC_013061 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013061:717752 Pedobacter heparinus DSM 2366, complete genome

Host Lineage: Pedobacter heparinus; Pedobacter; Sphingobacteriaceae; Sphingobacteriales; Bacteroidetes; Bacteria

General Information: Isolation: Soil; Temp: Mesophile; Temp: 25 - 30C; Habitat: Soil. Formerly Sphingobacterium heparinum this organism was isolated from soil. This organism is able to degrade heparin and heparan sulfate glycosaminoglycans, which are components of extracellular polysaccharides and the cell surface.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
7177527198662115translation elongation factor GQuickGO ontologyBLASTP
719931720236306ribosomal protein S10QuickGO ontologyBLASTP
720303720911609hypothetical proteinBLASTP
720993721829837protein of unknown function DUF81QuickGO ontologyBLASTP
721826722221396protein of unknown function DUF1634QuickGO ontologyBLASTP
722404723021618ribosomal protein L3QuickGO ontologyBLASTP
723026723655630ribosomal protein L4L1eQuickGO ontologyBLASTP
723657723947291Ribosomal protein L25L23QuickGO ontologyBLASTP
723972724796825ribosomal protein L2QuickGO ontologyBLASTP
724796725062267ribosomal protein S19QuickGO ontologyBLASTP
725070725432363ribosomal protein L22QuickGO ontologyBLASTP
725438726295858ribosomal protein S3QuickGO ontologyBLASTP
726334726756423ribosomal protein L16QuickGO ontologyBLASTP
726829727038210ribosomal protein L29QuickGO ontologyBLASTP
727052727306255ribosomal protein S17QuickGO ontologyBLASTP
727308727676369ribosomal protein L14QuickGO ontologyBLASTP
727678728016339ribosomal protein L24QuickGO ontologyBLASTP
728016728582567ribosomal protein L5QuickGO ontologyBLASTP
728582728851270ribosomal protein S14QuickGO ontologyBLASTP
728963729361399ribosomal protein S8QuickGO ontologyBLASTP
729380729937558ribosomal protein L6QuickGO ontologyBLASTP
729943730296354ribosomal protein L18QuickGO ontologyBLASTP
730315730833519ribosomal protein S5QuickGO ontologyBLASTP
730838731017180ribosomal protein L30QuickGO ontologyBLASTP
731133731579447ribosomal protein L15QuickGO ontologyBLASTP
7315837329171335preprotein translocase SecY subunitQuickGO ontologyBLASTP
732926733714789methionine aminopeptidase type IQuickGO ontologyBLASTP
733782734000219translation initiation factor IF-1QuickGO ontologyBLASTP
734002734118117ribosomal protein L36QuickGO ontologyBLASTP
734231734608378ribosomal protein S13QuickGO ontologyBLASTP
734630735019390ribosomal protein S11QuickGO ontologyBLASTP
735085735693609ribosomal protein S4QuickGO ontologyBLASTP
735771736763993DNA-directed RNA polymerase alpha subunitQuickGO ontologyBLASTP
736854737405552ribosomal protein L17QuickGO ontologyBLASTP
7374657380195552-5 RNA ligaseQuickGO ontologyBLASTP
7380777392911215hypothetical proteinBLASTP
7394577413761920chaperone protein DnaKQuickGO ontologyBLASTP