Pre_GI Gene

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Host: NC_013061 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013061:4712051 Pedobacter heparinus DSM 2366, complete genome

Host Lineage: Pedobacter heparinus; Pedobacter; Sphingobacteriaceae; Sphingobacteriales; Bacteroidetes; Bacteria

General Information: Isolation: Soil; Temp: Mesophile; Temp: 25 - 30C; Habitat: Soil. Formerly Sphingobacterium heparinum this organism was isolated from soil. This organism is able to degrade heparin and heparan sulfate glycosaminoglycans, which are components of extracellular polysaccharides and the cell surface.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
471205147149542904hypothetical proteinBLASTP
47149814715835855dTDP-4-dehydrorhamnose reductaseQuickGO ontologyBLASTP
471585447174701617hypothetical proteinBLASTP
471746747194251959polysaccharide biosynthesis protein CapDQuickGO ontologyBLASTP
47196504720249600sugar transferaseQuickGO ontologyBLASTP
472024647214511206DegTDnrJEryC1StrS aminotransferaseQuickGO ontologyBLASTP
47214524722030579hypothetical proteinBLASTP
472202047232611242glycosyl transferase group 1QuickGO ontologyBLASTP
47232614724250990NAD-dependent epimerasedehydrataseQuickGO ontologyBLASTP
472425047255631314nucleotide sugar dehydrogenaseQuickGO ontologyBLASTP
472565147268831233glycosyl transferase group 1QuickGO ontologyBLASTP
47268874727762876glycosyl transferase family 2QuickGO ontologyBLASTP
472776247289731212hypothetical protein
47290054729937933NAD-dependent epimerasedehydrataseQuickGO ontologyBLASTP
472993447311721239glycosyl transferase group 1QuickGO ontologyBLASTP
473116947327131545polysaccharide biosynthesis proteinQuickGO ontologyBLASTP
473273847340421305hypothetical protein
473406347353161254putative LPS biosynthesis proteinQuickGO ontologyBLASTP
47353134736179867histidine biosynthesis proteinQuickGO ontologyBLASTP
47361814736804624imidazole glycerol phosphate synthase glutamine amidotransferase subunitQuickGO ontologyBLASTP
473680147379311131LPS biosynthesis protein WbpGQuickGO ontologyBLASTP
47379284738473546GCN5-related N-acetyltransferaseQuickGO ontologyBLASTP
47384734739360888hypothetical proteinBLASTP