Pre_GI Gene

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Host: NC_013061 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013061:2288134 Pedobacter heparinus DSM 2366, complete genome

Host Lineage: Pedobacter heparinus; Pedobacter; Sphingobacteriaceae; Sphingobacteriales; Bacteroidetes; Bacteria

General Information: Isolation: Soil; Temp: Mesophile; Temp: 25 - 30C; Habitat: Soil. Formerly Sphingobacterium heparinum this organism was isolated from soil. This organism is able to degrade heparin and heparan sulfate glycosaminoglycans, which are components of extracellular polysaccharides and the cell surface.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
228813422914393306TonB-dependent receptor plugQuickGO ontologyBLASTP
229144522928301386RagBSusD domain proteinQuickGO ontologyBLASTP
229287322944381566alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergenQuickGO ontologyBLASTP
22945332294738206
22950822295651570RNA polymerase sigma factor sigma-70 familyQuickGO ontologyBLASTP
22957082295827120hypothetical protein
22959322296324393hypothetical proteinBLASTP
22962962297117822FecR proteinQuickGO ontologyBLASTP
229736523009283564TonB-dependent receptor plugQuickGO ontologyBLASTP
230094523023031359hypothetical proteinBLASTP
230233523038401506alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergenQuickGO ontologyBLASTP
23038422304288447hypothetical proteinBLASTP
230430923069812673hypothetical proteinBLASTP
2306997230709296hypothetical protein
23072652307588324helix-turn-helix domain proteinQuickGO ontologyBLASTP
23077512308173423hypothetical proteinBLASTP
23083042308960657hypothetical proteinBLASTP
23093922309649258BLASTP
231017023115341365hypothetical protein
23118002312456657hypothetical proteinBLASTP
231245823144461989putative ATP-dependent helicaseQuickGO ontologyBLASTP