Pre_GI Gene

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Host: NC_013061 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013061:2247191 Pedobacter heparinus DSM 2366, complete genome

Host Lineage: Pedobacter heparinus; Pedobacter; Sphingobacteriaceae; Sphingobacteriales; Bacteroidetes; Bacteria

General Information: Isolation: Soil; Temp: Mesophile; Temp: 25 - 30C; Habitat: Soil. Formerly Sphingobacterium heparinum this organism was isolated from soil. This organism is able to degrade heparin and heparan sulfate glycosaminoglycans, which are components of extracellular polysaccharides and the cell surface.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
22471912248039849NAD-dependent epimerasedehydrataseQuickGO ontologyBLASTP
22481262248332207Cold-shock protein DNA-bindingQuickGO ontologyBLASTP
22484472248719273hypothetical protein
22487702249237468hypothetical protein
224929722528363540PAS sensor proteinQuickGO ontologyBLASTP
22533342253705372hypothetical protein
22539432254326384response regulator receiverQuickGO ontologyBLASTP
225432322554081086sugar transferaseQuickGO ontologyBLASTP
225549322570701578hypothetical proteinBLASTP
22571042258054951hypothetical protein
225807422592671194glycosyl transferase group 1QuickGO ontologyBLASTP
22599552260644690Outer membrane proteinQuickGO ontology
226066522628122148lipopolysaccharide biosynthesis proteinQuickGO ontologyBLASTP
226286622643111446hypothetical proteinBLASTP
22643132264414102hypothetical protein
22644292265073645Acetyltransferase isoleucine patch superfamilyQuickGO ontologyBLASTP
22650832265856774glycosyl transferase family 2QuickGO ontologyBLASTP
226589322671131221glycosyl transferase group 1QuickGO ontologyBLASTP
226713122683181188Glycosyltransferase probably involved in cell wall biogenesisQuickGO ontologyBLASTP
22683502269210861glycosyl transferase family 2QuickGO ontologyBLASTP
22693782269953576twin-arginine translocation pathway signalQuickGO ontologyBLASTP
226997122716471677hypothetical proteinBLASTP
227165622730891434polysaccharide biosynthesis proteinQuickGO ontologyBLASTP
22731242273927804glycosyl transferase family 2QuickGO ontologyBLASTP
227405922754381380hypothetical protein
22756552276467813glycosyl transferase family 11QuickGO ontologyBLASTP
22764762277459984hypothetical protein
22774562278316861glycosyl transferase family 14QuickGO ontologyBLASTP
227835022799781629hypothetical protein
22800542280728675Haloacid dehalogenase domain protein hydrolaseQuickGO ontologyBLASTP
228072822817621035UbiA prenyltransferaseQuickGO ontologyBLASTP