Pre_GI Gene

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Host: NC_013061 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013061:1360081 Pedobacter heparinus DSM 2366, complete genome

Host Lineage: Pedobacter heparinus; Pedobacter; Sphingobacteriaceae; Sphingobacteriales; Bacteroidetes; Bacteria

General Information: Isolation: Soil; Temp: Mesophile; Temp: 25 - 30C; Habitat: Soil. Formerly Sphingobacterium heparinum this organism was isolated from soil. This organism is able to degrade heparin and heparan sulfate glycosaminoglycans, which are components of extracellular polysaccharides and the cell surface.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
136008113617451665glycoside hydrolase family 28QuickGO ontologyBLASTP
136176413628281065pectate lyaseQuickGO ontologyBLASTP
136300813645251518Mannitol dehydrogenase domain proteinQuickGO ontologyBLASTP
136452213661741653Altronate dehydrataseQuickGO ontologyBLASTP
136620613676061401Glucuronate isomeraseQuickGO ontologyBLASTP
13685001370009151016S ribosomal RNAQuickGO ontologyBLASTP
1370191137026575tRNA-IleQuickGO ontology
1370284137036077tRNA-AlaQuickGO ontologyBLASTP
13705871373464287823S ribosomal RNAQuickGO ontologyBLASTP
13739901374970981Acyl-acyl-carrier-protein desaturaseQuickGO ontologyBLASTP
137497413783693396Methylmalonyl-CoA mutaseQuickGO ontologyBLASTP
137852013801871668type I phosphodiesterasenucleotide pyrophosphataseQuickGO ontologyBLASTP