Pre_GI Gene

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Host: NC_013061 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013061:1236235 Pedobacter heparinus DSM 2366, complete genome

Host Lineage: Pedobacter heparinus; Pedobacter; Sphingobacteriaceae; Sphingobacteriales; Bacteroidetes; Bacteria

General Information: Isolation: Soil; Temp: Mesophile; Temp: 25 - 30C; Habitat: Soil. Formerly Sphingobacterium heparinum this organism was isolated from soil. This organism is able to degrade heparin and heparan sulfate glycosaminoglycans, which are components of extracellular polysaccharides and the cell surface.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
123623512397083474YD repeat-containing proteinQuickGO ontologyBLASTP
12397081240157450hypothetical proteinBLASTP
12403411240637297BLASTP
12410381241649612hypothetical protein
12419031242802900hypothetical proteinBLASTP
12427991243731933hypothetical proteinBLASTP
12437331244686954hypothetical proteinBLASTP
12446921245675984hypothetical proteinBLASTP
12456971246638942hypothetical proteinBLASTP
12466401247344705hypothetical proteinBLASTP
12473531248189837hypothetical proteinBLASTP
12483751249280906hypothetical proteinBLASTP
12492641250253990hypothetical proteinBLASTP
12502721251222951hypothetical proteinBLASTP
125122912524281200hypothetical proteinBLASTP
125250512535361032hypothetical proteinBLASTP
12535391254402864hypothetical proteinBLASTP
12543991255367969hypothetical proteinBLASTP
12553891256147759hypothetical proteinBLASTP
12566221257349728BLASTP
12574201258283864hypothetical proteinBLASTP
12587021259268567RNA polymerase sigma factor sigma-70 familyQuickGO ontologyBLASTP
125930112604731173AAA ATPaseQuickGO ontologyBLASTP
126060512617591155FecR proteinQuickGO ontologyBLASTP
126200712655793573TonB-dependent receptorQuickGO ontologyBLASTP