Pre_GI Gene

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Host: NC_013061 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013061:1052957 Pedobacter heparinus DSM 2366, complete genome

Host Lineage: Pedobacter heparinus; Pedobacter; Sphingobacteriaceae; Sphingobacteriales; Bacteroidetes; Bacteria

General Information: Isolation: Soil; Temp: Mesophile; Temp: 25 - 30C; Habitat: Soil. Formerly Sphingobacterium heparinum this organism was isolated from soil. This organism is able to degrade heparin and heparan sulfate glycosaminoglycans, which are components of extracellular polysaccharides and the cell surface.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
105295710563763420hypothetical proteinBLASTP
10566321057201570RNA polymerase sigma-70 factorQuickGO ontologyBLASTP
105735910584021044filamentation induced by cAMP protein FicQuickGO ontologyBLASTP
105853910597021164FecR proteinQuickGO ontologyBLASTP
105999710635423546TonB-dependent receptorQuickGO ontologyBLASTP
106354710649471401hypothetical proteinBLASTP
106502710662501224Redoxin domain proteinQuickGO ontologyBLASTP
106626210674791218alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergenQuickGO ontologyBLASTP
10674811068212732hypothetical proteinBLASTP
10682401068695456hypothetical proteinBLASTP
10687451069182438hypothetical protein
106918710702391053hypothetical proteinBLASTP
10704821071099618hypothetical proteinBLASTP
10710801071400321helix-turn-helix domain proteinQuickGO ontologyBLASTP
10715461071848303hypothetical proteinBLASTP
10718491072271423hypothetical proteinBLASTP
10723521072585234hypothetical proteinBLASTP
10728121073474663hypothetical proteinBLASTP
10735601074141582hypothetical proteinBLASTP
10742251074485261hypothetical protein
107456810756141047hypothetical proteinBLASTP
10758211076462642hypothetical proteinBLASTP
10764591077316858hypothetical protein
10775431078190648hypothetical proteinBLASTP
10783511078743393hypothetical protein
10786831079177495hypothetical proteinBLASTP
107941310804231011hypothetical proteinBLASTP
10804331080765333MazG nucleotide pyrophosphohydrolaseQuickGO ontologyBLASTP
108089810828051908ATPGTP-binding protein putativeQuickGO ontologyBLASTP
10828021083224423DNA mismatch endonuclease VsrQuickGO ontologyBLASTP
108338410848081425DNA-cytosine methyltransferaseQuickGO ontologyBLASTP
108481110858631053DNA-cytosine methyltransferaseQuickGO ontologyBLASTP
108586510869801116restriction endonucleaseQuickGO ontologyBLASTP
108698910884491461ATPaseQuickGO ontologyBLASTP
108845510901251671endonucleaseQuickGO ontologyBLASTP
109016010912061047endonucleaseQuickGO ontologyBLASTP
109119910922001002hypothetical proteinBLASTP
109220210942202019hypothetical proteinBLASTP
10942201094702483hypothetical proteinBLASTP
10947211095611891transcriptional regulator domain proteinQuickGO ontologyBLASTP
10957721096281510hypothetical proteinBLASTP
109635310992352883glycoside hydrolase family 2 sugar bindingQuickGO ontologyBLASTP
10992541099970717hypothetical proteinBLASTP
11001611100787627Methyltransferase type 11QuickGO ontologyBLASTP
11010171101766750hypothetical proteinBLASTP