Pre_GI Gene

Some Help

Host: NC_013008 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013008:3911356 Escherichia coli O157:H7 str. TW14359 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli O157:H7 str. TW14359 was isolated from spinach during the E. coli outbreak in 2006. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
391135639126211266pathogenicity island integraseQuickGO ontologyBLASTP
39127383913523786hypothetical proteinBLASTP
39136123914286675hypothetical proteinBLASTP
39142833914630348hypothetical proteinBLASTP
391465039158521203hypothetical proteinBLASTP
39158993916843945hypothetical proteinBLASTP
39169523917500549PagC-like membrane proteinQuickGO ontologyBLASTP
39180733918273201hypothetical proteinBLASTP
39185593919113555hypothetical proteinBLASTP
39188023919692891transposaseQuickGO ontologyBLASTP
39201663920336171hypothetical proteinBLASTP
392048039221291650non-LEE-encoded type III effectorQuickGO ontologyBLASTP
39223203922496177hypothetical proteinBLASTP
39227373923726990non-LEE-encoded type III effectorQuickGO ontologyBLASTP
39237753924449675non-LEE-encoded type III effectorQuickGO ontologyBLASTP
39248273925672846transposaseQuickGO ontologyBLASTP
3925751392580151
39284983929388891transposaseQuickGO ontologyBLASTP
39293853929711327transposaseQuickGO ontologyBLASTP
39299023930249348transposaseQuickGO ontologyBLASTP
393029939318371539transposase ISEc8QuickGO ontologyBLASTP
39320603932410351hypothetical proteinBLASTP
393262339340261404hypothetical proteinBLASTP
39341183934288171transposaseQuickGO ontologyBLASTP
39343453934689345transposaseQuickGO ontologyBLASTP
393453239358481317phosphatesulfate permeaseQuickGO ontologyBLASTP
393614039379991860bifunctional glutathionylspermidine amidaseglutathionylspermidine synthetaseQuickGO ontologyBLASTP