Pre_GI Gene

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Host: NC_012984 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012984:520000 Lactobacillus plantarum JDM1, complete genome

Host Lineage: Lactobacillus plantarum; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: This strain is a Chinese commercial lactic acid bacterium with several probiotic functions. Lactobacillus plantarum are commonly isolated from plant material, and the gastrointestinal tract of animals. This organism is used in the production of fermented foods such as saurkraut, kimchi and sourdough bread. This organism is also of interest as a probiotic to maintain and regulate the human intestinal microflora.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
520018520467450Gp40 proteinQuickGO ontology
520623520808186hypothetical protein
52088552095066hypothetical protein
521271521522252hypothetical protein
521519521998480hypothetical proteinBLASTP
5221505234091260Helicase-like proteinType III restriction enzyme res subunitDEADDEAH box helicase-like proteinQuickGO ontologyBLASTP
523406524122717phage NTP-binding proteinQuickGO ontologyBLASTP
524125524724600hypothetical protein
524738525292555hypothetical protein
525366526160795prophage Lp3 protein 7QuickGO ontologyBLASTP
5261575274311275prophage Lp3 protein 8 helicaseQuickGO ontologyBLASTP
527689528021333phage proteinQuickGO ontologyBLASTP
528041528265225hypothetical proteinBLASTP
528291528677387prophage Lp2 protein 26QuickGO ontologyBLASTP
528674529135462prophage Lp1 protein 31QuickGO ontology
529262529573312hypothetical protein
529585530016432hypothetical proteinBLASTP
530195530902708hypothetical protein
530971531186216hypothetical protein
531649531762114hypothetical protein
531796532047252hypothetical protein
532158532445288gp1 proteinQuickGO ontologyBLASTP
5324425341241683TerminaseQuickGO ontologyBLASTP
5341435352851143phage portal protein HK97 familyQuickGO ontologyBLASTP
535272536015744Clp protease domain proteinQuickGO ontologyBLASTP
5360365372141179major head protein CpsQuickGO ontologyBLASTP
537354537659306hypothetical proteinBLASTP
537640538029390gp8 proteinQuickGO ontologyBLASTP
538026538433408gp9 proteinQuickGO ontologyBLASTP
538430538852423gp10 proteinQuickGO ontologyBLASTP
538867539478612putative major tail proteinQuickGO ontologyBLASTP
539571539885315hypothetical protein
5400725439773906tape measure proteinQuickGO ontologyBLASTP