Pre_GI Gene

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Host: NC_012967 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012967:531000 Escherichia coli B str. REL606 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli B str. REL606 is unable to use arabinose due to a mutation. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
531082531774693pilin chaperoneQuickGO ontologyBLASTP
5318055344142610putative outer membrane export usher proteinQuickGO ontologyBLASTP
534456535433978putative fimbrial-like adhesin proteinQuickGO ontologyBLASTP
535444535959516putative fimbrial proteinQuickGO ontologyBLASTP
535962536594633transcriptional regulator FimZQuickGO ontologyBLASTP
5369295380921164putative integraseQuickGO ontologyBLASTP
537948538349402ExcisionaseQuickGO ontologyBLASTP
538617538835219hypothetical proteinBLASTP
538934539248315hypothetical proteinBLASTP
539226539591366putative DNA N-6-adenine-methyltransferase of bacteriophageQuickGO ontologyBLASTP
539602539838237BLASTP
539952540137186hypothetical proteinBLASTP
540205540537333multidrug efflux proteinQuickGO ontologyBLASTP
5407925423181527putative recombinaseQuickGO ontologyBLASTP
542783543334552putative kinase inhibitorQuickGO ontologyBLASTP
543344544141798putative DNA-binding transcriptional regulatorQuickGO ontologyBLASTP
544356544811456hypothetical proteinBLASTP
544811544981171prophage protein NinEQuickGO ontologyBLASTP
544974545264291hypothetical proteinBLASTP
545261545623363endodeoxyribonuclease RUSQuickGO ontologyBLASTP
545620545760141hypothetical proteinBLASTP
545846546229384putative antitermination proteinQuickGO ontologyBLASTP
546947547450504IS1 protein InsBQuickGO ontologyBLASTP
547369547644276IS1 protein InsAQuickGO ontologyBLASTP
548867549082216putative phage lysis proteinQuickGO ontologyBLASTP
549082549579498putative lysozymeQuickGO ontologyBLASTP
549576550037462putative murein endopeptidaseQuickGO ontologyBLASTP
550069550362294putative lipoproteinQuickGO ontologyBLASTP
550723550917195hypothetical proteinBLASTP
551306551881576DNA packaging proteinQuickGO ontologyBLASTP
5518415546572817putative tail component of prophageQuickGO ontologyBLASTP
5547165570612346hypothetical proteinBLASTP
557058557339282hypothetical proteinBLASTP
557349558053705hypothetical proteinBLASTP
558064558357294hypothetical proteinBLASTP
558112558447336hypothetical proteinBLASTP