Pre_GI Gene

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Host: NC_012962 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012962:4942000 Photorhabdus asymbiotica, complete genome

Host Lineage: Photorhabdus asymbiotica; Photorhabdus; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is a North American clinical isolate from human blood. Photorhabdus asymbiota, formerly Xenorhabdus luminescens, has been isolated from human wound and blood infections often in association with spider bites. This species can also be isolated from the entomopathogenic nematode Heterorhabditis indica. Photorhabdus asymbiota is divided into two subspecies, subsp. australis which contains the Australian clinical isolates and subsp. asymbiota which contains the North American isolates. Photorhabdus is currently subdivided into three species, luminescens, temperate and asymbiotica all of which have been isolated as symbionts of heterorhabditid nematodes. This organism is unusual in that it is symbiotic within one insect, and pathogenic in another, the only organism that is known to exhibit this dual phenotype.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
49420804942439360hypothetical proteinBLASTP
49424364942774339hypothetical proteinBLASTP
49431664943414249hypothetical proteinBLASTP
49434854944096612hypothetical proteinBLASTP
49441864944638453tail fiber assembly protein homolog from lambdoid prophage dlp12QuickGO ontologyBLASTP
494463949458861248putative phage protein gphQuickGO ontologyBLASTP
49459154946163249probable variable tail fibre proteinQuickGO ontologyBLASTP
49461604946435276putative bacteriophage protein precursorQuickGO ontologyBLASTP
49463814946773393putative bacteriophage protein precursorQuickGO ontologyBLASTP
49467664947680915probable bacteriophage baseplate assembly proteinQuickGO ontologyBLASTP
49476774948018342phage baseplate assembly proteinQuickGO ontologyBLASTP
49480154948689675putative phage baseplate assembly proteinQuickGO ontologyBLASTP
49486914949356666predicted tail completion phage proteinQuickGO ontologyBLASTP
49493584949774417putative phage tail proteinQuickGO ontologyBLASTP
49499154950301387putative bacteriophage proteinQuickGO ontologyBLASTP
49502984950693396similarities with phage structural protein p5QuickGO ontologyBLASTP
49506864951009324similar to bacteriophage proteinQuickGO ontologyBLASTP
49509734951215243probable phage tail proteinQuickGO ontologyBLASTP
49512154951679465putative capsid completion proteinQuickGO ontologyBLASTP
49517644952429666phage r protein enterobacteria phage 186 gbaac341511 u32222QuickGO ontologyBLASTP
495242249535371116major capsid proteinQuickGO ontologyBLASTP
49535524954388837putative capsid scaffolding proteinQuickGO ontologyBLASTP
495453149562881758probable phage terminase subunitQuickGO ontologyBLASTP
49563584957341984probable capsid portal proteinQuickGO ontologyBLASTP
49576574957962306prophage protein gp48QuickGO ontologyBLASTP
49579714958306336putative bacteriophage proteinQuickGO ontologyBLASTP
49585544959162609dna-cytosine methyltransferaseQuickGO ontologyBLASTP
49591814959684504cytosine-specific DNA methyltransferaseQuickGO ontologyBLASTP
49596814960262582putative phage replication proteinQuickGO ontologyBLASTP
49603354961183849putative phage replication proteinQuickGO ontologyBLASTP
49612674961809543hypothetical proteinBLASTP
49618064962285480putative DNA adenine methylaseQuickGO ontologyBLASTP
49625274962766240probable bacteriophage cox proteinQuickGO ontologyBLASTP
49628984963191294hypothetical phage repressor protein cQuickGO ontologyBLASTP
49635234964221699putative phage integraseQuickGO ontologyBLASTP