Pre_GI Gene

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Host: NC_012947 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012947:3883484 Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, complete

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolation: Derivative of E. coli strain B; Temp: Mesophile; Temp: 37 C; Habitat: Host, Human intestinal microflora. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
38834843884386903FimH mannose-binding domain proteinQuickGO ontologyBLASTP
38844063884909504fimbrial proteinQuickGO ontologyBLASTP
38849223885452531fimbrial proteinQuickGO ontologyBLASTP
388546238880982637fimbrial biogenesis outer membrane usher proteinQuickGO ontologyBLASTP
38881653888890726Pili assembly chaperone N-terminalQuickGO ontologyBLASTP
38889273889466540fimbrial proteinQuickGO ontologyBLASTP
38895313890079549fimbrial proteinQuickGO ontologyBLASTP
38905613891157597tyrosine recombinaseQuickGO ontologyBLASTP
38918253892100276Insertion element proteinQuickGO ontologyBLASTP
38920193892522504IS1 transposaseQuickGO ontologyBLASTP
38925163893013498integraseQuickGO ontologyBLASTP
38944693895185717oligogalacturonate-specific porinQuickGO ontologyBLASTP
389520538963111107N-acetylneuraminic acid mutarotaseQuickGO ontologyBLASTP
38963763897356981hypothetical proteinBLASTP
38999173900174258hypothetical proteinBLASTP
39001863900731546GCN5-related N-acetyltransferaseQuickGO ontologyBLASTP
39007873901533747methyltransferase type 11QuickGO ontologyBLASTP
390231939034401122peptidase M42 family proteinQuickGO ontologyBLASTP
39034373903715279protein-Npi-phosphohistidine--sugar phosphotransferaseQuickGO ontologyBLASTP
390372739050401314PTS system galactitol-specific IIC subunitQuickGO ontologyBLASTP
39050533905859807photosystem I assembly BtpAQuickGO ontologyBLASTP
39059903906421432PTS IIA-like nitrogen-regulatory protein PtsNQuickGO ontologyBLASTP
39064333907065633epimeraseQuickGO ontologyBLASTP
39070823907864783DeoR family transcriptional regulatorQuickGO ontologyBLASTP
39080543908329276Insertion element proteinQuickGO ontologyBLASTP
39082483908751504IS1 transposaseQuickGO ontologyBLASTP