Pre_GI Gene

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Host: NC_012815 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012815:1494263 Bifidobacterium animalis subsp. lactis DSM 10140, complete genome

Host Lineage: Bifidobacterium animalis; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Bifidobacterium animalis subsp. lactis (strain DSM 10140 / JCM 10602 / LMG 18314) is an anaerobic Gram-positive lactic acid bacterium commonly found in the guts of healthy humans and has been identified in the infant gut biota, particularly in ileal, fecal, and mucosal samples. Some strains of B. animalis subsp. lactis are able to survive in the GIT, to adhere to human epithelial cells in vitro, to modify fecal flora, to modulate the host immune response, or to prevent microbial gastroenteritis and colitis.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
149426314963412079ABC transporterQuickGO ontologyBLASTP
149633814983111974ABC-type multidrug transport system ATPase and permease componentQuickGO ontologyBLASTP
14983081498859552MarR-type transcriptional regulatorQuickGO ontologyBLASTP
14991171499683567NADPH-dependent reductaseQuickGO ontologyBLASTP
14999261500309384Very short patch repair Vsr endonucleaseQuickGO ontologyBLASTP
15013401501528189hypothetical proteinBLASTP
15018911502151261hypothetical proteinBLASTP
150222215032681047putative CRISPR-associated Csb3 family proteinQuickGO ontologyBLASTP
150327215063253054CRISPR-associated helicase Cas3 family proteinQuickGO ontologyBLASTP
150631615079531638putative CRISPR-associated Csb2 family proteinQuickGO ontologyBLASTP
150797215091651194putative CRISPR-associated Csb1 family proteinQuickGO ontologyBLASTP
15095821509875294CRISPR-associated Cas2 family proteinQuickGO ontologyBLASTP
150988715113771491CRISPR-associated Cas1Cas4 family proteinQuickGO ontologyBLASTP
151313115142821152Gamma-glutamylcysteine synthetaseQuickGO ontologyBLASTP
151447615191944719hypothetical proteinBLASTP
15194441520013570hypothetical proteinBLASTP
15200101520411402transmembrane proteinQuickGO ontologyBLASTP
15206741521363690hypothetical proteinBLASTP
15213601522109750anaerobic ribonucleoside-triphosphate reductase activating proteinQuickGO ontologyBLASTP
152245115248772427anaerobic ribonucleoside triphosphate reductaseQuickGO ontologyBLASTP