Pre_GI Gene

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Host: NC_012792 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012792:707864 Variovorax paradoxus S110 chromosome 2, complete genome

Host Lineage: Variovorax paradoxus; Variovorax; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Soil. Variovorax paradoxus S110 is able to grow autotrophically using hydrogen gas and carbon dioxide for energy and carbon. Variovorax paradoxus is a nutritionally diverse organism which is commonly isolated from soil. Strains of this organism are able to degrade a number of compounds such as explosives and pesticides. Variovorax paradoxus is also a plant-growth promoting organism, increasing the resistance of the plant to disease and heavy metals.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
7078647089371074transcriptional regulator AraC familyQuickGO ontologyBLASTP
708969709091123hypothetical protein
7092727108431572transposase IS66QuickGO ontologyBLASTP
710901711233333IS66 Orf2 family proteinQuickGO ontologyBLASTP
711230711577348transposase IS3IS911 family proteinQuickGO ontologyBLASTP
712589712864276hypothetical protein
712887713042156hypothetical protein
71326271335190BLASTP
713554713883330Collagen triple helix repeat proteinQuickGO ontology
713995714246252response regulator receiver proteinQuickGO ontologyBLASTP
714754714912159hypothetical protein
715056715307252hypothetical protein
7153477164711125histidine kinaseQuickGO ontologyBLASTP
716714717454741transcriptional regulator CrpFnr familyQuickGO ontologyBLASTP
717576718283708putative transcriptional regulator CrpFnr familyQuickGO ontologyBLASTP
718487718927441hypothetical proteinBLASTP
720251720472222hypothetical protein
720852721163312response regulator receiver proteinQuickGO ontologyBLASTP
721748722674927hypothetical protein
722883723434552hypothetical protein
723642724427786Domain of unknown function DUF1814QuickGO ontologyBLASTP
724424725353930hypothetical proteinBLASTP
725726726127402aspartate 1-decarboxylaseQuickGO ontologyBLASTP