Pre_GI Gene

Some Help

Host: NC_012792 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012792:310443 Variovorax paradoxus S110 chromosome 2, complete genome

Host Lineage: Variovorax paradoxus; Variovorax; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Soil. Variovorax paradoxus S110 is able to grow autotrophically using hydrogen gas and carbon dioxide for energy and carbon. Variovorax paradoxus is a nutritionally diverse organism which is commonly isolated from soil. Strains of this organism are able to degrade a number of compounds such as explosives and pesticides. Variovorax paradoxus is also a plant-growth promoting organism, increasing the resistance of the plant to disease and heavy metals.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
3104433133972955FAD dependent oxidoreductaseQuickGO ontologyBLASTP
3134073146751269peptidase M20QuickGO ontologyBLASTP
314672315406735ABC transporter relatedQuickGO ontologyBLASTP
315648316373726HAD-superfamily hydrolase subfamily IA variant 2 HAD-likeQuickGO ontologyBLASTP
316346317101756protein of unknown function DUF81QuickGO ontologyBLASTP
3171803181811002hypothetical proteinBLASTP
318308319210903transcriptional regulator LysR familyQuickGO ontologyBLASTP
319261320094834amidohydrolase 2QuickGO ontologyBLASTP
320161320841681Fe-S type hydro-lyase tartratefumarate beta regionQuickGO ontologyBLASTP
320835321770936hydro-lyase Fe-S type tartratefumarate subfamily alpha subunitQuickGO ontologyBLASTP
3217833235221740fumarate reductasesuccinate dehydrogenase flavoprotein domain proteinQuickGO ontologyBLASTP
323524323868345succinate dehydrogenase cytochrome b subunitQuickGO ontology
323865324200336hypothetical protein
324202324936735succinate dehydrogenase and fumarate reductase iron-sulfur proteinQuickGO ontologyBLASTP
325264325554291hypothetical proteinBLASTP
325551325871321plasmid stabilization systemQuickGO ontologyBLASTP
325991326623633putative transmembrane proteinQuickGO ontologyBLASTP
326696327595900transcriptional regulator LysR familyQuickGO ontologyBLASTP
3276383291161479AmidaseQuickGO ontologyBLASTP
329160330125966hypothetical proteinBLASTP
3301373315851449drug resistance transporter EmrBQacA subfamilyQuickGO ontologyBLASTP
331604332047444protein of unknown function DUF1486QuickGO ontologyBLASTP
332154332924771transcriptional regulator AraC familyQuickGO ontologyBLASTP