Pre_GI Gene

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Host: NC_012791 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012791:4736084 Variovorax paradoxus S110 chromosome 1, complete genome

Host Lineage: Variovorax paradoxus; Variovorax; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Soil. Variovorax paradoxus S110 is able to grow autotrophically using hydrogen gas and carbon dioxide for energy and carbon. Variovorax paradoxus is a nutritionally diverse organism which is commonly isolated from soil. Strains of this organism are able to degrade a number of compounds such as explosives and pesticides. Variovorax paradoxus is also a plant-growth promoting organism, increasing the resistance of the plant to disease and heavy metals.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
473608447379131830oxalyl-CoA decarboxylaseQuickGO ontologyBLASTP
4737959473805193hypothetical protein
47380704738678609putative transcriptional regulator CrpFnr familyQuickGO ontologyBLASTP
47386934739529837transport-associatedQuickGO ontologyBLASTP
473954547410741530protein of unknown function DUF112 transmembraneQuickGO ontologyBLASTP
47410964741695600hypothetical protein
474173647427611026hypothetical proteinBLASTP
47430794743315237hypothetical protein
4743371474344575tRNA-ArgQuickGO ontology
474362147448501230integrase family proteinQuickGO ontologyBLASTP
47451214745258138hypothetical protein
47453844745710327plasmid stabilization systemQuickGO ontologyBLASTP
474806347495111449transposase IS4 family proteinQuickGO ontologyBLASTP
47496624750012351hypothetical proteinBLASTP
47504394750987549protein of unknown function DUF1003QuickGO ontologyBLASTP
475215747533531197putative transposaseQuickGO ontologyBLASTP
47533634754235873integrase family proteinQuickGO ontologyBLASTP
47546564755303648hypothetical protein
47554844755765282hypothetical protein
47559614756209249ISPpu13 transposase Orf3QuickGO ontologyBLASTP
47563884756939552hypothetical proteinBLASTP
47569784757649672hypothetical protein
47582364758808573GCN5-related N-acetyltransferaseQuickGO ontologyBLASTP
47600824760390309hypothetical protein
47604354760965531hypothetical protein
476096247631452184hypothetical proteinBLASTP
47632974763692396hypothetical protein
47640804764187108BLASTP
47642904765150861hypothetical proteinBLASTP
47652294765984756Domain of unknown function DUF1814QuickGO ontologyBLASTP
4766020476610990BLASTP
47671024767473372BLASTP
47675864767858273
47678584768130273phage transcriptional regulator AlpAQuickGO ontologyBLASTP
47683864768652267phage transcriptional regulator AlpAQuickGO ontologyBLASTP
47690484769443396hypothetical protein
476950147712491749Polypeptide-transport-associated domain protein ShlB-typeQuickGO ontologyBLASTP
47713264771934609hypothetical protein
47720184772968951hypothetical proteinBLASTP
4772994478464811655filamentous hemagglutinin family outer membrane proteinQuickGO ontologyBLASTP