Pre_GI Gene

Some Help

Host: NC_012791 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012791:2832001 Variovorax paradoxus S110 chromosome 1, complete genome

Host Lineage: Variovorax paradoxus; Variovorax; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Soil. Variovorax paradoxus S110 is able to grow autotrophically using hydrogen gas and carbon dioxide for energy and carbon. Variovorax paradoxus is a nutritionally diverse organism which is commonly isolated from soil. Strains of this organism are able to degrade a number of compounds such as explosives and pesticides. Variovorax paradoxus is also a plant-growth promoting organism, increasing the resistance of the plant to disease and heavy metals.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
283200128335271527ribonuclease RneRng familyQuickGO ontologyBLASTP
283353528352561722lipid A ABC exporter fused ATPase and inner membrane subunits MsbAQuickGO ontologyBLASTP
283557128367971227Tol-Pal system beta propeller repeat protein TolBQuickGO ontologyBLASTP
28368232837341519peptidoglycan-associated lipoproteinQuickGO ontologyBLASTP
28373412838090750tol-pal system protein YbgFQuickGO ontologyBLASTP
28381582838952795UBATHIF-type NADFAD binding proteinQuickGO ontologyBLASTP
2839014283908976tRNA-LysQuickGO ontologyBLASTP
283917328403361164BLASTP
28403332840713381transcriptional regulator XRE familyQuickGO ontologyBLASTP
28408192841199381hypothetical protein
28414072842201795hypothetical proteinBLASTP
28439992844760762hypothetical protein
28452142845792579hypothetical protein
28459542846757804IstB domain protein ATP-binding proteinQuickGO ontologyBLASTP
284675428482471494transposaseQuickGO ontologyBLASTP
28487752849041267hypothetical protein
28491352849494360hypothetical protein
28494912849985495hypothetical protein
28509132851062150
28511982851368171hypothetical protein
285153028530321503TPR repeat-containing proteinQuickGO ontologyBLASTP
28539212854190270hypothetical protein
28559772856747771hypothetical proteinBLASTP
28573132857981669transcriptional regulator XRE familyQuickGO ontologyBLASTP
28584202858923504hypothetical proteinBLASTP
285894928609011953ABC transporter relatedQuickGO ontologyBLASTP
28610442861925882modification methylase HemK familyQuickGO ontologyBLASTP
286198728631621176succinyl-diaminopimelate desuccinylaseQuickGO ontologyBLASTP
286317928643271149twitching motility proteinQuickGO ontologyBLASTP
286436228651958342345-tetrahydropyridine-26-dicarboxylate N-succinyltransferaseQuickGO ontologyBLASTP