Pre_GI Gene

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Host: NC_012791 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012791:2622923 Variovorax paradoxus S110 chromosome 1, complete genome

Host Lineage: Variovorax paradoxus; Variovorax; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Soil. Variovorax paradoxus S110 is able to grow autotrophically using hydrogen gas and carbon dioxide for energy and carbon. Variovorax paradoxus is a nutritionally diverse organism which is commonly isolated from soil. Strains of this organism are able to degrade a number of compounds such as explosives and pesticides. Variovorax paradoxus is also a plant-growth promoting organism, increasing the resistance of the plant to disease and heavy metals.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
262292326254782556hypothetical proteinBLASTP
26254752626407933hypothetical protein
26264042627282879hypothetical proteinBLASTP
26272792627719441hypothetical proteinBLASTP
262771626309463231hypothetical proteinBLASTP
263094326331802238hypothetical proteinBLASTP
26332432633575333hypothetical protein
26335722633877306hypothetical protein
26338802634380501glycoside hydrolase family 24QuickGO ontologyBLASTP
26343772634550174hypothetical protein
26345472635089543hypothetical protein
26351002635327228hypothetical protein
26353242635500177hypothetical protein
26354972635688192hypothetical protein
26356852635996312hypothetical protein
26359932636424432hypothetical protein
26366322637363732HAD-superfamily hydrolase subfamily IA variant 1QuickGO ontologyBLASTP
26373652637670306NIPSNAP family containing proteinQuickGO ontologyBLASTP
26376992638001303hypothetical proteinBLASTP
263799826392421245squalene-associated FAD-dependent desaturaseQuickGO ontologyBLASTP
26392542640093840squalene synthase HpnDQuickGO ontologyBLASTP
26400902640947858squalene synthase HpnCQuickGO ontologyBLASTP
264115226429961845K potassium transporterQuickGO ontologyBLASTP
264309326442861194efflux transporter RND family MFP subunitQuickGO ontologyBLASTP
264428326474383156acriflavin resistance proteinQuickGO ontologyBLASTP