Pre_GI Gene

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Host: NC_012660 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012660:5793200 Pseudomonas fluorescens SBW25 chromosome, complete genome

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Isolated in 1989 from the leaf surface of a sugar beet plant grown at the University Farm, Wytham, Oxford, UK. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
579320057948941695glycolate permeaseQuickGO ontologyBLASTP
579496457977742811putative FAD-binding oxidoreductaseQuickGO ontologyBLASTP
57979255798203279hypothetical proteinBLASTP
579887858000831206putative phage integraseQuickGO ontologyBLASTP
58002245800910687BLASTP
58008225801457636putative DNA invertaseQuickGO ontologyBLASTP
58016785802652975putative phage integraseQuickGO ontologyBLASTP
58031935803558366hypothetical proteinBLASTP
58039385804429492hypothetical proteinBLASTP
58049895805441453BLASTP
58060565806511456hypothetical protein
58072125807529318hypothetical protein
58077585808648891BLASTP
58085975808905309transposase for insertion sequence elementQuickGO ontologyBLASTP
58095145809696183
58096975810305609hypothetical proteinBLASTP
58102925810501210hypothetical protein
58105845810709126hypothetical protein
58111425811780639putative TetR family regulatory proteinQuickGO ontologyBLASTP
581189758134471551putative antibiotic transporter-like membrane proteinQuickGO ontologyBLASTP
58134505814130681hypothetical proteinBLASTP
58141605814468309hypothetical proteinBLASTP
581507558162291155putative AraC family regulatory proteinQuickGO ontologyBLASTP
581618758179681782putative GMC oxidoreductaseQuickGO ontologyBLASTP
581788958203872499putative flavin-binding monooxygenase-like proteinQuickGO ontologyBLASTP
58203845821229846putative dehydrogenaseQuickGO ontologyBLASTP
582182858233931566putative recombinaseQuickGO ontologyBLASTP
58233965824304909putative ParB-like proteinQuickGO ontologyBLASTP
58243065825211906putative plasmid partitioning proteinQuickGO ontologyBLASTP
58254855825802318putative transposaseQuickGO ontologyBLASTP
58257995826134336putative transposaseQuickGO ontologyBLASTP
582618558277111527putative transposaseQuickGO ontologyBLASTP
582783458298372004putative methyl-accepting chemotaxis proteinQuickGO ontologyBLASTP
58301965830510315hypothetical proteinBLASTP
583075358317931041hypothetical proteinBLASTP
58323075832609303hypothetical protein