Pre_GI: BLASTP Hits

Some Help

Query: NC_012660:5793200:5800224 Pseudomonas fluorescens SBW25 chromosome, complete genome

Start: 5800224, End: 5800910, Length: 687

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Isolated in 1989 from the leaf surface of a sugar beet plant grown at the University Farm, Wytham, Oxford, UK. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017986:1862408:1867994186799418728954902Pseudomonas putida ND6 chromosome, complete genomehelicase domain-containing protein2e-123441
NC_004578:20738:4744847448523584911Pseudomonas syringae pv. tomato str. DC3000, complete genomehelicase domain protein1e-117422
NC_014844:442380:4507084507084555494842Desulfovibrio aespoeensis Aspo-2 chromosome, complete genometype III restriction protein res subunit9e-87319
NC_007651:3560652:3585806358580635889973192Burkholderia thailandensis E264 chromosome I, complete sequencehelicase domain protein2e-80298
NC_008095:2117952:2132683213268321376534971Myxococcus xanthus DK 1622, complete genomeputative restriction/modification enzyme1e-77289
NC_011958:976500:99589499589410007564863Rhodobacter sphaeroides KD131 chromosome 2, complete genomehypothetical protein2e-62238
NC_014153:3084356:3085256308525630902865031Thiomonas intermedia K12 chromosome, complete genometype III restriction protein res subunit2e-60231
NC_008826:84218:8994089940947874848Methylibium petroleiphilum PM1 plasmid RPME01, complete sequenceadenine specific DNA methyltransferase, putative4e-56218
NC_012846:929570:9295709295709344804911Bartonella grahamii as4aup, complete genomehelicase/methyltransferase2e-55215
NC_010161:432000:455554455554456534981Bartonella tribocorum CIP 105476, complete genomehelicase domain-containing protein5e-55214
NC_012846:1952178:1969434196943419744104977Bartonella grahamii as4aup, complete genome1e-54213
NC_012846:1778443:1797703179770318026804978Bartonella grahamii as4aup, complete genome1e-54213
NC_008752:620802:6280546280546328834830Acidovorax avenae subsp. citrulli AAC00-1, complete genometype III restriction enzyme, res subunit9e-53206
NC_009328:2905000:2918927291892729236874761Geobacillus thermodenitrificans NG80-2 chromosome, complete genomehypothetical protein5e-51200
NC_008538:46469:5781957819626604842Arthrobacter sp. FB24 plasmid 2, complete sequencetype III restriction enzyme, res subunit3e-50198
NC_017098:1542284:1558173155817315630234851Spirochaeta africana DSM 8902 chromosome, complete genomeputative helicase8e-49193
NC_015152:2026049:2036181203618120410794899Spirochaeta sp. Buddy chromosome, complete genometype III restriction protein res subunit3e-47188
NC_017955:1667500:1678714167871416834834770Modestobacter marinus, complete genomeHelicase2e-45182
NC_016943:1442885:1462107146210714668704764Blastococcus saxobsidens DD2, complete genomeputative Helicase4e-45181
NC_014168:1724993:1735931173593117408414911Segniliparus rotundus DSM 44985 chromosome, complete genometype III restriction protein res subunit5e-45181
NC_012724:2682154:2696731269673127014944764Burkholderia glumae BGR1 chromosome 1, complete genomeAdenine specific DNA methyltransferase, putative6e-43174
NC_015578:2191000:2208590220859022135905001Treponema primitia ZAS-2 chromosome, complete genomeendonuclease and methylase LlaGI7e-43173
NC_021064:793098:7984197984198010342616Propionibacterium avidum 44067, complete genomehelicase7e-42170
NC_015578:1038588:1050775105077510557544980Treponema primitia ZAS-2 chromosome, complete genomeendonuclease and methylase LlaGI2e-41168
NC_009615:1734752:1779432177943217844264995Parabacteroides distasonis ATCC 8503 chromosome, complete genomehelicase4e-41167
NC_014215:349917:3633313633313681124782Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,helicase3e-40164
NC_002937:2263763:2270961227096122757484788Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completeadenine specific DNA methyltransferase, putative2e-39162
NC_006958:3240019:3249976324997632549164941Corynebacterium glutamicum ATCC 13032, complete genomeDNA or RNA helicase of superfamily II1e-37156
NC_003450:3266604:3276669327666932816004932Corynebacterium glutamicum ATCC 13032, complete genomeputative helicase1e-37156
NC_017150:1940000:1942610194261019475174908Acetobacter pasteurianus IFO 3283-01-42C, complete genomeDNA helicase restriction enzyme Type III R subunit2e-32139
NC_017146:2035000:2037526203752620424334908Acetobacter pasteurianus IFO 3283-26, complete genomeDNA helicase restriction enzyme Type III R subunit2e-32139
NC_017121:2032500:2034846203484620397534908Acetobacter pasteurianus IFO 3283-07, complete genomeDNA helicase restriction enzyme Type III R subunit2e-32139
NC_017100:2035000:2037519203751920424114893Acetobacter pasteurianus IFO 3283-03, complete genomeDNA helicase restriction enzyme Type III R subunit2e-32139
NC_013209:2032500:2034864203486420397714908Acetobacter pasteurianus IFO 3283-01, complete genomeDNA helicase restriction enzyme Type III R subunit2e-32139
NC_008229:1149480:1155450115545011586923243Helicobacter acinonychis str. Sheeba, complete genomehelicase4e-32138
NC_017111:2032500:2034834203483420389224089Acetobacter pasteurianus IFO 3283-32, complete genomeDNA helicase restriction enzyme Type III R subunit3e-32138
NC_017108:2032500:2034846203484620389044059Acetobacter pasteurianus IFO 3283-12, complete genomeDNA helicase restriction enzyme Type III R subunit3e-32138
NC_017125:2035000:2037514203751420423914878Acetobacter pasteurianus IFO 3283-22, complete genomeDNA helicase restriction enzyme Type III R subunit2e-32138
NC_013165:1584977:1608043160804316135865544Slackia heliotrinireducens DSM 20476, complete genomepredicted helicase1e-30133
NC_008341:29038:447554475545192438Nitrosomonas eutropha C91 plasmid1, complete sequencehelicase domain protein2e-29129
NC_013714:2350749:2362655236265523647302076Bifidobacterium dentium Bd1, complete genomeHelicase3e-24112
NC_014820:1057826:1065686106568610692133528Cenarchaeum symbiosum A, complete genomehelicase6e-21100
NC_013209:2032500:203285620328562033089234Acetobacter pasteurianus IFO 3283-01, complete genomeDNA helicase restriction enzyme Type III R subunit4e-1995.1
NC_017100:2035000:203551120355112035744234Acetobacter pasteurianus IFO 3283-03, complete genomeDNA helicase restriction enzyme Type III R subunit4e-1995.1
NC_017108:2032500:203283820328382033071234Acetobacter pasteurianus IFO 3283-12, complete genomeDNA helicase restriction enzyme Type III R subunit4e-1995.1
NC_017111:2032500:203282620328262033059234Acetobacter pasteurianus IFO 3283-32, complete genomeDNA helicase restriction enzyme Type III R subunit4e-1995.1
NC_017121:2032500:203283820328382033071234Acetobacter pasteurianus IFO 3283-07, complete genomeDNA helicase restriction enzyme Type III R subunit4e-1995.1
NC_017125:2035000:203550620355062035739234Acetobacter pasteurianus IFO 3283-22, complete genomeDNA helicase restriction enzyme Type III R subunit4e-1995.1
NC_017146:2035000:203551820355182035751234Acetobacter pasteurianus IFO 3283-26, complete genomeDNA helicase restriction enzyme Type III R subunit4e-1995.1
NC_017150:1940000:194060219406021940835234Acetobacter pasteurianus IFO 3283-01-42C, complete genomeDNA helicase restriction enzyme Type III R subunit4e-1995.1
NC_002620:705075:7193787193787223923015Chlamydia muridarum Nigg, complete genomehelicase, putative1e-1583.6
NC_008341:29038:3215032150366914542Nitrosomonas eutropha C91 plasmid1, complete sequencetype III restriction enzyme, res subunit3e-1478.6
NC_017167:1648913:1719871171987117242504380Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1adenine specific DNA methyltransferase2e-1375.9
NC_017167:2298962:2330637233063723316741038Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1hypothetical protein1e-1273.2
NC_015380:859424:8632188632188663583141Candidatus Pelagibacter sp. IMCC9063 chromosome, complete genomehypothetical protein2e-0859.3
NC_016109:8761557:8766141876614187696953555Kitasatospora setae KM-6054, complete genomehypothetical protein6e-0754.3
NC_016109:1:1358413584171383555Kitasatospora setae KM-6054, complete genomehypothetical protein6e-0754.3