Pre_GI Gene

Some Help

Host: NC_012587 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012587:3177583 Rhizobium sp. NGR234, complete genome

Host Lineage: Sinorhizobium fredii; Sinorhizobium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This organism, much like other Rhizobia, forms a symbiotic relationship with a leguminous plant, such as soybean, cowpea or pigeon pea. Expression of nodulation genes results in production of a nodulation signal which the plant cell recognizes inducing root nodule formation. The plant cell provides carbon compounds for the bacterium to grow on.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
31768103177586777putative transcriptional regulator GntR familyQuickGO ontologyBLASTP
31775833178353771pyrroline-5-carboxylate reductaseQuickGO ontologyBLASTP
31784853178961477putative transcriptional regulator MarR familyQuickGO ontologyBLASTP
31792003179733534hypothetical proteinBLASTP
31800653180616552hypothetical proteinBLASTP
31807543181452699two component transcriptional regulatorQuickGO ontologyBLASTP
318152131827681248sensor proteinQuickGO ontologyBLASTP
3183030318310677tRNA-MetQuickGO ontology
318335831834771205S ribosomal RNAQuickGO ontology
31837163186516280123S ribosomal RNAQuickGO ontologyBLASTP
3187094318716976tRNA-AlaQuickGO ontologyBLASTP
3187235318731177tRNA-IleQuickGO ontology
31875903189010142116S ribosomal RNAQuickGO ontologyBLASTP
31896973190554858putative oxidoreductasestress-related proteinQuickGO ontologyBLASTP
31907313190967237hypothetical protein
31909943191188195hypothetical protein
31913093192007699hypothetical proteinBLASTP
319200831931831176putative DNA topoisomerase I proteinQuickGO ontologyBLASTP
31933613194344984putative short-chain dehydrogenasereductaseQuickGO ontologyBLASTP
319438231955541173putative glutathione-dependent formaldehyde dehydrogenaseQuickGO ontologyBLASTP
31956913196401711putative metallophosphoesteraseQuickGO ontologyBLASTP
31964143197223810hypothetical proteinBLASTP
31973733197978606hypothetical proteinBLASTP
31980493198360312hypothetical proteinBLASTP
31985443198705162hypothetical protein
3198960319903677tRNA-ArgQuickGO ontology
31992363200132897putative sugar kinaseputative transcriptional regulatorQuickGO ontologyBLASTP
32004103200907498hypothetical proteinBLASTP