Pre_GI Gene

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Host: NC_012560 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012560:1322000 Azotobacter vinelandii DJ, complete genome

Host Lineage: Azotobacter vinelandii; Azotobacter; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism was first isolated from the soil in Vineland, New Jersey, although it is found worldwide. It is a large obligate aerobe that has one of the highest respiratory rates of any organism. Azotobacter vinelandii also produces a number of unusual nitrogenases which allow it to fix atmospheric nitrogen to ammonia, a compound it can then use as a nitrogen source. It protects the oxygen-sensitive nitrogenase enzymes through its high respiratory rate, which sequesters the nitrogenase complexes in an anoxic environment. This organism has a number of unusual characteristics. Under extreme environmental conditions, the cell will produce a cyst that is resistant to dessication and is surrounded by two capsular polysaccharide layers. This organism produces two industrially important polysaccharides, poly-beta-hydroxybutyrate (PHB) and alginate. PHB is a thermoplastic biopolymer, and alginate is used in the food industry. Alginate is also used by the pathogen Pseudomonas aeruginosa to infect the lungs of cystic fibrosis patients.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
132265213236681017Transposase IS116IS110IS902QuickGO ontologyBLASTP
13240381324679642transposaseQuickGO ontologyBLASTP
13253581325831474transposaseQuickGO ontologyBLASTP
13261531326851699uracil-DNA glycosylaseQuickGO ontologyBLASTP
13268611327808948ygfZ-like proteinQuickGO ontologyBLASTP
13279241328178255hypothetical proteinBLASTP
13281621328614453hypothetical proteinBLASTP
132858313301991617L-aspartate oxidaseQuickGO ontologyBLASTP
13307941331747954transposaseQuickGO ontologyBLASTP
13322021332789588sigma factor algU negative regulatory protein MucAQuickGO ontologyBLASTP
13327981333751954sigma factor algU negative regulatory protein MucBQuickGO ontologyBLASTP
13337481334218471Positive regulator for alginate biosynthesis MucCQuickGO ontologyBLASTP
133423013356511422HtrA serine proteaseQuickGO ontologyBLASTP
133580013375991800GTP-binding protein LepAQuickGO ontologyBLASTP
13376041338455852signal peptidase IQuickGO ontologyBLASTP
13389111339600690ribonuclease IIIQuickGO ontologyBLASTP
13395931340495903GTP-binding protein EraQuickGO ontologyBLASTP
13409511341085135hypothetical proteinBLASTP
134182713430801254Alginate lyaseQuickGO ontologyBLASTP
13432931343985693DNA repair protein RecOQuickGO ontologyBLASTP
13439781344724747pyridoxal phosphate biosynthetic protein PdxJQuickGO ontologyBLASTP
13447211344927207hypothetical proteinBLASTP
13449611345920960methyltransferaseQuickGO ontologyBLASTP
13459171346660744methyltransferaseQuickGO ontologyBLASTP
13467491347147399hypothetical proteinBLASTP
13473401348143804transcriptional regulatory protein IclR familyQuickGO ontologyBLASTP
134818813496841497methylmalonate-semialdehyde dehydrogenaseQuickGO ontologyBLASTP
134972913508891161Iron-containing alcohol dehydrogenaseQuickGO ontologyBLASTP
135091313523041392integral membrane permeaseGntP familycitrate transporterQuickGO ontologyBLASTP
135251813549202403ATP-dependent protease LaQuickGO ontologyBLASTP
13549951355108114hypothetical proteinBLASTP
135509713571452049TonB-dependent receptorQuickGO ontologyBLASTP