Pre_GI Gene

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Host: NC_012483 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012483:3731542 Acidobacterium capsulatum ATCC 51196, complete genome

Host Lineage: Acidobacterium capsulatum; Acidobacterium; Acidobacteriaceae; Acidobacteriales; Acidobacteria; Bacteria

General Information: Isolated from acidic mine drainage in Yanahara mine, Okayama, Japan. Acidophilic bacterium. This genus comprises a number of species commonly found in water reservoirs, microbial mats, many different soil types, marine and freshwater sediments, as well as in hot-spring mats and sediments, etc. Furthermore, they sometimes form the dominant group in a habitat. These bacteria are involved in the first step of destruction of biologically complex molecules produced by autotrophic (capable of synthesizing their own nutrients) microorganisms. Acidobacterium capsulatum is an aerobic, mesophilic, chemo-organotroph able to use a variety of carbon sources and to grow up to pH 6.0. The species comprises several strains characterized by orange pigmentation, production of menoquinones as their sole quinones, and branched-chain iso fatty acids as their cell envelope components.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
373154237339412400hypothetical proteinBLASTP
37340153734149135hypothetical protein
373422937361121884asparagine synthetase familyQuickGO ontologyBLASTP
37361253736493369hypothetical proteinBLASTP
373651837379151398hypothetical protein
373839237394771086hypothetical proteinBLASTP
37397873739972186hypothetical protein
37411193741715597hypothetical proteinBLASTP
37423263742751426limonene-12-epoxide hydrolase catalytic domain proteinQuickGO ontology
37427183742870153hypothetical protein
37428573743537681hypothetical proteinBLASTP
37446493745233585hypothetical protein
37461653747094930group II intron-encoded maturaseQuickGO ontologyBLASTP
3747098374717275Group II catalytic intronQuickGO ontology
37486293749411783ISAca2 transposase istBQuickGO ontologyBLASTP
3750352375042675Group II catalytic intronQuickGO ontology
37523783752833456hypothetical proteinBLASTP
375283737548311995hypothetical proteinBLASTP
375484137575942754conjugative relaxase domain proteinQuickGO ontologyBLASTP
375773537600052271PIWI domain proteinQuickGO ontologyBLASTP
376000237612071206hypothetical proteinBLASTP
376141737624901074hypothetical protein
37625723763366795hypothetical protein
376339337650931701helicase UvrDREP familyQuickGO ontologyBLASTP
376510237669491848hypothetical proteinBLASTP
37670353767964930hypothetical protein
376797337696581686hypothetical protein
376969537711401446hypothetical proteinBLASTP
37714553772237783ISAca2 transposase istBQuickGO ontologyBLASTP
37735553774124570hypothetical proteinBLASTP
37742253774599375single-strand binding domain proteinQuickGO ontologyBLASTP
37750873776016930type IIIV secretion system family proteinQuickGO ontologyBLASTP
37760523776885834hypothetical protein
37770123777926915hypothetical protein
37779423778061120hypothetical protein
37779483778169222hypothetical protein
37781813778966786hypothetical protein
377898137802521272putative conjugal transfer protein TrbI familyQuickGO ontologyBLASTP
37802553781088834putative conjugal transfer proteinQuickGO ontology
378111337834792367type IV secretionconjugal transfer ATPase VirB4 familyQuickGO ontologyBLASTP
37834603783723264transporter type IV conjugal DNA-protein transfer or VirB secretory pathway IVSP familyQuickGO ontology
37837363784143408
378517537862121038hypothetical protein
37866113787198588hypothetical proteinBLASTP
37872033787583381putative DNA-binding proteinQuickGO ontologyBLASTP
378873737902991563hypothetical proteinBLASTP
379041937923861968hypothetical proteinBLASTP
379287637941081233hypothetical proteinBLASTP
37945723795144573hypothetical proteinBLASTP
37951473795596450transcriptional regulator MerR familyQuickGO ontologyBLASTP
37962333797123891dihydrodipicolinate synthaseQuickGO ontologyBLASTP
379713637984281293pyridine nucleotide-disulfide oxidoreductaseQuickGO ontologyBLASTP
379865937997921134oxidoreductase FAD-dependentQuickGO ontologyBLASTP
37997893800736948putative proline racemaseQuickGO ontologyBLASTP
38009483801052105hypothetical protein
380109838033772280dipeptidyl peptidase putativeQuickGO ontologyBLASTP
380364838070853438Cna protein B-type domain proteinQuickGO ontologyBLASTP