Pre_GI Gene

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Host: NC_012108 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012108:2220983 Desulfobacterium autotrophicum HRM2, complete genome

Host Lineage: Desulfobacterium autotrophicum; Desulfobacterium; Desulfobacteraceae; Desulfobacterales; Proteobacteria; Bacteria

General Information: It was isolated from a marine sediment in the Mediterranean sea near Venice, Italy. It is involved in the anaerobic mineralization of organic matter coming from the water column. Desulfobacterium autotrophicum is capable of growing litho-autotrophically with H2, CO2 and sulfate, but also by coupling sulfate reduction with the oxidation of fatty acids. This organism can transform tetra to dichlormethane.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
22209832221915933transposase for insertion sequence 801 transposase 32 family proteinQuickGO ontologyBLASTP
22220442222214171hypothetical proteinBLASTP
22221962222957762XerD3QuickGO ontologyBLASTP
22231272223651525hypothetical proteinBLASTP
22236482224052405putative DNA polymerase beta-like regionQuickGO ontologyBLASTP
22240272224452426hypothetical proteinBLASTP
22244572225290834hypothetical proteinBLASTP
22254252225685261hypothetical protein
22256762226068393PIN domain protein PilT N terminusQuickGO ontologyBLASTP
22260612226927867polysaccharide deacetylase family proteinQuickGO ontologyBLASTP
22269242227208285hypothetical protein
22272202227903684hypothetical proteinBLASTP
22281212229119999uncharacterized protein involved in methicillin resistanceQuickGO ontologyBLASTP
222913522303791245glycosyl transferase group IQuickGO ontologyBLASTP
223038222315211140TuaHQuickGO ontologyBLASTP
223158522326461062putative O-actetyl transferaseQuickGO ontologyBLASTP
223267522342221548putative O-antigen and teichonic acid transporterQuickGO ontologyBLASTP
223431022354881179hypothetical proteinBLASTP
22356112236180570hypothetical protein
223631822379341617hypothetical protein
223831122394111101hypothetical proteinBLASTP
223966722409801314hypothetical proteinBLASTP
224114922424291281hypothetical proteinBLASTP
224243422437621329RfaLQuickGO ontologyBLASTP
22437752244395621TPR-repeat containing proteinQuickGO ontologyBLASTP
224443322455661134RfaG2QuickGO ontologyBLASTP
224557222467441173glycosyl transferase group 1 family proteinQuickGO ontologyBLASTP
22467582246997240hypothetical protein
22469942247284291hypothetical proteinBLASTP
224731322485841272CarB1QuickGO ontologyBLASTP
224859622496001005putative polysaccharide deacetylase family proteinQuickGO ontologyBLASTP
224962522510011377putative coenzyme F390 synthetase FtsAQuickGO ontologyBLASTP
22510132251801789DppA1QuickGO ontologyBLASTP
22518502252833984hypothetical protein
22530002253428429hypothetical proteinBLASTP
225360522548791275putative VanZ-like membrane proteinQuickGO ontologyBLASTP
225488922559771089CapAQuickGO ontologyBLASTP
225597422591263153PyrKQuickGO ontologyBLASTP
22591442259335192CysKQuickGO ontologyBLASTP
22594192259700282transposase class V family proteinQuickGO ontologyBLASTP
22596812260529849IstA1QuickGO ontologyBLASTP
226097022629762007CysS1QuickGO ontologyBLASTP
22630042263426423VanZ-like family proteinQuickGO ontologyBLASTP
226345122647431293metallo-beta-lactamase family protein RNaseQuickGO ontologyBLASTP
22650262265925900putative N-acyl-L-homoserine lactone synthetaseQuickGO ontologyBLASTP
22658522266616765putative long-chain N-acyl amino acid synthaseQuickGO ontologyBLASTP
226684222688812040putative dinucleotide-utilizing biosynthesis family protein molybdopterin and thiamine biosynthesis family proteinQuickGO ontologyBLASTP
22689112269675765LolD2QuickGO ontologyBLASTP
226968122709371257LolEQuickGO ontologyBLASTP
22709572271712756LolFQuickGO ontologyBLASTP