Pre_GI Gene

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Host: NC_011985 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011985:61003 Agrobacterium radiobacter K84 chromosome 1, complete genome

Host Lineage: Agrobacterium tumefaciens; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain has been developed for worldwide commercial use to control crown gall. This species is used commercially to control crown gall, a tumorogenic plant disease caused by the ubiquitous soil-borne pathogen Agrobacterium tumefaciens, which affects susceptible woody plants worldwide. The pathogen is responsible for nursery and orchard losses among stone fruit trees, grapes, apples, pears, nut trees, caneberries, clematis, hops, kiwifruit, persimmons, roses and many ornamental annuals, trees and shrubs. Infected plants are usually weakened and unproductive due to their damaged root system.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
6100361590588two-component response regulator proteinQuickGO ontologyBLASTP
61666630031338two-component sensor histidine kinase proteinQuickGO ontologyBLASTP
63006654742469ATP-dependent helicase HrpBQuickGO ontologyBLASTP
6548066430951ornithine cyclodeaminase proteinQuickGO ontologyBLASTP
6714968657150916S ribosomal RNA operon 1QuickGO ontologyBLASTP
689386901174tRNA-IleQuickGO ontology
691416921373tRNA-AlaQuickGO ontologyBLASTP
6993972560262223S ribosomal RNA operon 1QuickGO ontologyBLASTP
72693728111195S ribosomal RNA operon 1QuickGO ontologyBLASTP
729557302874tRNA-MetQuickGO ontology
7322273560339BLASTP
7407274647576hypothetical proteinBLASTP
7464075245606hypothetical proteinBLASTP
75885772791395hypothetical proteinBLASTP
7774078315576hypothetical proteinBLASTP
7850179181681hypothetical proteinBLASTP
79201809521752Hemolysin activationsecretion proteinQuickGO ontologyBLASTP
81107910609954Filamentous hemagglutininQuickGO ontologyBLASTP
9191892610693hypothetical proteinBLASTP
9260093358759BLASTP
9351094304795hypothetical protein
9479294992201hypothetical proteinBLASTP
9498995366378hypothetical proteinBLASTP
9602396688666hypothetical proteinBLASTP
9685397116264transposase proteinQuickGO ontologyBLASTP
9726998153885transcriptional regulator proteinQuickGO ontologyBLASTP
98316994401125oxidoreductase proteinQuickGO ontologyBLASTP
99433100401969D-3-phosphoglycerate dehydrogenase proteinQuickGO ontologyBLASTP
100401101207807hydroxyacid aldolase proteinQuickGO ontologyBLASTP
1012171026471431succinate-semialdehyde dehydrogenase proteinQuickGO ontologyBLASTP
1026511036581008myo-inositol 2-dehydrogenase proteinQuickGO ontologyBLASTP
1037621056331872myo-inositol catabolismQuickGO ontologyBLASTP