Pre_GI Gene

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Host: NC_011985 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011985:3892630 Agrobacterium radiobacter K84 chromosome 1, complete genome

Host Lineage: Agrobacterium tumefaciens; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain has been developed for worldwide commercial use to control crown gall. This species is used commercially to control crown gall, a tumorogenic plant disease caused by the ubiquitous soil-borne pathogen Agrobacterium tumefaciens, which affects susceptible woody plants worldwide. The pathogen is responsible for nursery and orchard losses among stone fruit trees, grapes, apples, pears, nut trees, caneberries, clematis, hops, kiwifruit, persimmons, roses and many ornamental annuals, trees and shrubs. Infected plants are usually weakened and unproductive due to their damaged root system.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
389263038937661137glycosyltransferase proteinQuickGO ontologyBLASTP
38939953894281287BLASTP
38948783895243366hypothetical proteinBLASTP
38952403895593354transposaseQuickGO ontologyBLASTP
389566238971881527transposaseQuickGO ontologyBLASTP
38972573897736480hypothetical protein
38982513898655405insertion sequence transposase proteinQuickGO ontologyBLASTP
38986523899035384insertion sequence transposase proteinQuickGO ontologyBLASTP
38993883899522135hypothetical protein
389950239024862985glycosyltransferase proteinQuickGO ontologyBLASTP
390264939044571809hydrolase HAD superfamilyQuickGO ontologyBLASTP
390445439067092256glycosyl transferaseQuickGO ontologyBLASTP
39068153907792978mannosyltransferase BQuickGO ontologyBLASTP
39079613908860900hypothetical proteinBLASTP
390886439099821119glycosyltransferaseQuickGO ontologyBLASTP
39099823910548567Phosphoglyceratebisphosphoglycerate mutaseQuickGO ontology
39106493911581933glucose-1-phosphate thymidylyltransferaseQuickGO ontologyBLASTP
39116163912167552dTDP-4-dehydrorhamnose 35-epimeraseQuickGO ontologyBLASTP
391227239133301059dTDP-glucose 46-dehydrataseQuickGO ontologyBLASTP
39133273914214888dTDP-4-dehydrorhamnose reductaseQuickGO ontologyBLASTP
39143313915167837glycosyl transferaseQuickGO ontologyBLASTP
39151713915917747polysaccharide ABC transporterQuickGO ontologyBLASTP
391591439170261113glycosyltransferase proteinQuickGO ontologyBLASTP
39170263918003978Glycosyl transferase proteinQuickGO ontologyBLASTP
391806739194431377hypothetical proteinBLASTP
391944039210291590hypothetical proteinBLASTP
392103739221581122UDP-N-acetylglucosamine 2-epimeraseQuickGO ontologyBLASTP
392218839233271140glycosyltransferase proteinQuickGO ontologyBLASTP
39245123924664153hypothetical protein