Pre_GI Gene

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Host: NC_011742 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011742:2863316 Escherichia coli S88 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli S88 is a serotype O45:K1 strain isolated from a case of neonatal meningitis. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
28633162863705390Crossover junction endodeoxyribonucleaseQuickGO ontologyBLASTP
28637022864028327regulatory protein lexA-binding domainQuickGO ontologyBLASTP
28640252864711687AdoMet-dependent methyltransferaseQuickGO ontologyBLASTP
28646782865172495hypothetical proteinBLASTP
28651692866110942phage replication protein OQuickGO ontologyBLASTP
28661202866458339hypothetical proteinBLASTP
28664552867018564nucleic acid-binding protein e14 prophageQuickGO ontologyBLASTP
28670502867553504DNA-binding transcriptional regulatorQuickGO ontologyBLASTP
28673412868015675repressor protein phage e14 e14 prophageQuickGO ontologyBLASTP
28680232868169147hypothetical protein
28682182868730513hypothetical proteinBLASTP
28688812869561681hypothetical proteinBLASTP
28696272870451825hypothetical proteinBLASTP
28705792871103525hypothetical proteinBLASTP
28711882872078891hypothetical proteinBLASTP
28720812872326246hypothetical proteinBLASTP
287228728734591173hypothetical proteinBLASTP
28734512874068618hypothetical proteinBLASTP
28740792874405327hypothetical proteinBLASTP
28744102875321912hypothetical proteinBLASTP
28752872875550264hypothetical proteinBLASTP
28761822877159978hypothetical proteinBLASTP
287717928784471269hydroxyglutarate oxidaseQuickGO ontologyBLASTP
287847028799181449succinate-semialdehyde dehydrogenase IQuickGO ontologyBLASTP
2879932288121212814-aminobutyrate aminotransferaseQuickGO ontologyBLASTP
288145028828501401gamma-aminobutyrate transporterQuickGO ontologyBLASTP
28828712883533663DNA-binding transcriptional regulator CsiRQuickGO ontologyBLASTP
28835342883983450LysM domainBON superfamily proteinQuickGO ontologyBLASTP
28840672884225159hypothetical proteinBLASTP
28844082884707300DNA-binding transcriptional regulatorQuickGO ontologyBLASTP
28847172885241525hypothetical proteinBLASTP
28852882885692405DNA binding proteinQuickGO ontologyBLASTP