Pre_GI Gene

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Host: NC_011601 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011601:1039500 Escherichia coli O127:H6 str. E2348/69 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Enteropathogenic Escherichia coli (EPEC) is an important cause of fatal infant diarrhea. EPEC induces diarrhea by attaching and effacing to host cells in the small intestine, inducing cytoskeletal rearrangements that result in pedastel formation, and then by introducing toxins into the host cell. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
1039534104060710744Fe-4S-binding proteinQuickGO ontologyBLASTP
104069010434222733hybrid sensory histidine kinase TorSQuickGO ontologyBLASTP
104351710445901074integraseQuickGO ontologyBLASTP
10445681044786219excisionaseQuickGO ontologyBLASTP
10448261044993168hypothetical proteinBLASTP
10450821045363282hypothetical proteinBLASTP
10455661046234669hypothetical proteinBLASTP
10462311046794564hypothetical proteinBLASTP
10469661047259294anti-RecBCD proteinQuickGO ontologyBLASTP
10472731047779507single-stranded DNA-binding proteinQuickGO ontologyBLASTP
10477801048487708recombination proteinQuickGO ontologyBLASTP
10484961048666171hypothetical proteinBLASTP
10485871048745159hypothetical proteinBLASTP
10487421048894153host killing proteinQuickGO ontologyBLASTP
10488791049013135reguratory proteinQuickGO ontologyBLASTP
10490891049457369single-stranded DNA binding proteinQuickGO ontologyBLASTP
10496081050078471hypothetical proteinBLASTP
10501371050409273antitermination proteinQuickGO ontologyBLASTP
10508481051690843DNA-damage-inducible proteinQuickGO ontologyBLASTP
10517711052424654repressor proteinQuickGO ontologyBLASTP
10525411052756216antirepressor proteinQuickGO ontologyBLASTP
10528981053194297regulatory proteinQuickGO ontologyBLASTP
10532271054126900replication proteinQuickGO ontologyBLASTP
10541231054824702replication proteinQuickGO ontologyBLASTP
10548211055111291exclusion proteinQuickGO ontologyBLASTP
10551841055510327hypothetical protein
10555331055979447protein NinBQuickGO ontologyBLASTP
10559761056503528DNA methylaseQuickGO ontologyBLASTP
10565001056682183protein NinEQuickGO ontologyBLASTP
10566791056849171protein NinFQuickGO ontologyBLASTP
10568421057564723DNA-binding proteinQuickGO ontologyBLASTP
10575641057854291hypothetical proteinBLASTP
10578511058213363crossover junction endodeoxyribonucleaseQuickGO ontologyBLASTP
10582101058344135hypothetical proteinBLASTP
10583561058979624late gene regulatorQuickGO ontologyBLASTP
10592591059975717membrane proteinQuickGO ontologyBLASTP