Pre_GI: BLASTP Hits

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Query: NC_011601:1039500:1050137 Escherichia coli O127:H6 str. E2348/69 chromosome, complete genome

Start: 1050137, End: 1050409, Length: 273

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Enteropathogenic Escherichia coli (EPEC) is an important cause of fatal infant diarrhea. EPEC induces diarrhea by attaching and effacing to host cells in the small intestine, inducing cytoskeletal rearrangements that result in pedastel formation, and then by introducing toxins into the host cell. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013364:2645438:265332626533262653598273Escherichia coli O111:H- str. 11128, complete genomeantitermination protein N3e-39160
NC_013941:975353:987759987759988103345Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeN protein5e-39159
NC_008563:1175035:118561511856151185959345Escherichia coli APEC O1, complete genomeN protein1e-38158
NC_007946:1239278:124822712482271248571345Escherichia coli UTI89, complete genomeN protein1e-38158
NC_002655:1332961:133989313398931340276384Escherichia coli O157:H7 EDL933, complete genomeputative antitermination protein N of bacteriophage BP-933W2e-1064.3
AP010958:5361207:537388453738845374267384Escherichia coli O103:H2 str. 12009 DNA, complete genomeprobable early gene regulator N2e-1064.3
NC_011353:3276734:328517132851713285554384Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeantitermination protein N2e-1064.3
NC_011601:2614691:262163626216362622019384Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeearly gene regulator2e-1064.3
NC_013008:3231414:324004232400423240425384Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeantitermination protein N of bacteriophage BP-933W2e-1064.3
NC_013353:5361207:537388453738845374267384Escherichia coli O103:H2 str. 12009, complete genomeearly gene regulator N2e-1064.3
NC_013361:1558423:156808715680871568470384Escherichia coli O26:H11 str. 11368 chromosome, complete genomeearly gene regulator N2e-1064.3
NC_013364:1183000:119115011911501191533384Escherichia coli O111:H- str. 11128, complete genomeputative early gene regulator N2e-1064.3
NC_014121:3627588:367423436742343674599366Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeantitermination protein N3e-0857.4
NC_017328:303987:316980316980317288309Shigella flexneri 2002017 chromosome, complete genomeantitermination of transcription at nut site protein1e-0652
NC_011751:1405381:141741414174141417806393Escherichia coli UMN026 chromosome, complete genomeputative regulatory protein N1e-0651.6
NC_011601:717072:728867728867729175309Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeearly gene regulator1e-0651.6
NC_013361:3287671:329656732965673296839273Escherichia coli O26:H11 str. 11368 chromosome, complete genomeantitermination protein N3e-0650.8